Lysobacter antibioticus 76: LA76x_2572
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Entry
LA76x_2572 CDS
T04154
Name
(GenBank) RHS repeat-associated core domain protein
Organism
lab
Lysobacter antibioticus 76
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpvB
TcdB_toxin_midC
TcdB_toxin_midN
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
ALN80702
UniProt:
A0A0S2FAY8
LinkDB
All DBs
Position
2890823..2899042
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AA seq
2739 aa
AA seq
DB search
MSVPIAVSPGRSGFGPQLSLSYDSGAGNGPFGFGWSVSLPAITRKTDKGLPQYLDTVDSD
VFVLSGAEDLVPVYRQDPDGTWVTHHEGFHRDMDGVHWVRDSSGHLVVHEDELDGYRVRR
YRPRIEGLFARIERWSKHDSPSDVHWRSISKNNILTLYGYDENSRIADPLDASRIFSWLI
CESRDDKGNGIRYLYKKENGDYQLRPGQSDPFKQVYQLNRGLPSDRRRAAQRYLQRVLYG
NRKPLLDGQGQRPRFLSDLPNSPTDTSADWLFEVRFDYGELDEGDPLGQPEKPWFYRPDA
FSSYRSGFEVRTCRRCERVLMLHHIPDQPAEPGRAAQSGYRGVVRSTEFSYDEELDPSLA
TQHVYSFLKQVVQTGWKQEGGSTMRRSLPPVEFEYTEPNVQEFVEEVDQASLENLPIGLD
GSAYRWTDLHGEGIPGILTEQATAWFYKRNLSPIPQKLPDGSEQVKAQFAPIETVALKPS
VALSGGAEFMDFAGDGLPDVVMMGGATPGLYEHDEAEGWQSFRPFVSRLNRDFRDPNLKF
IDLDGDGHADVLVTEDDAFVWHASLAEIGFGPARRVAQALDEEKGPRLVFSDGTQSIFLA
DMSGDGLTDLVRIRNSEICYWPNLGYCRFGDKVTMTFVDENGHSACFDHCDHFDHKRIRL
ADIDGSGTADIIYLHRDGVRLYFNQSGNGWSQPQVLKIFPRIDDLVSITPVDLLGNGTAC
LVWSSPLANDARRPMRYVNLMGGRRSGPAAHEQNLTPQKPHLLIAVRNNLGAETHIDYAP
STKFYLQDKHDGKPWITRLPFPVHVVERLETYDHISRNRFVTRYAYHHGYFDGEEREFRG
FGMVEQWDTEVFSALTEEDLSAENIAAVSHVPAVHSKTWFHTGVYLQRDRISNYFAGLLD
EKDKGEYYRRNPAGDAAADGASSRLLLPDTILPDDLTLDEEREACRALKGAMLRQEVYAD
DGSPKAGIPYSVTEQSFSIERLQERGSNRHAVFFTHARETLSYHYERNADDPRIQHALTL
EVDRYGNVLKSVDIGYGRTPGQSPLDGDDKAKQEQTHVTYTENRVTKATDDAATHQDDYR
APLPCETITYEVTGLKPRDDAPYFRFVDFANDPAYSLPALATIPYETPTNYASKQKRVIE
HVRTLYRKNDLSGLSQMGEVDSMALPGESYKLAFTPGLLDEVFKRPRQGQPDEPLLPEAA
RATILGGQSGNQGGYVDLDRNRHWWIPSGRSFYHPDDVTALVERAEACAHFFLPRRYRDP
FGQDAFVNFDARDLLMAEARDALGNRVTVDAHDYRVLQPRLVSDPNRNQTEVAFDTLGMV
VGTAVMGKPDEAPRPGDTLAGFTTDLTSAQLDAFVAAPCQPAADPDRSEATAIVHELLQG
ATTRIVYDIDRYQRLGEPPFAATIARETHVSDLGPGRKSHLQVSFSYSDGFGREIQKKIP
AEPGPLDVNDPASPVVNPRWVGSGWTIFNNKGKPVRQYEPFFDDTPAFKFAAIHGVSPVL
FYDPAERVIATLHPNHTYEKVVFDPWQQTTYDANDTCAPRAAPPGDPRPAQTGDPRTDPD
IAGYVAEYFKAQPPEWKTWVQKRISDPQNPPSDSRGQKPESDAAVRALAHTDTPTTAHFD
ALGRPFLTVARNRVVCKAHPLHEKPDEEFRTRVELDIEGSQREVHDERKLPDADNLPLGA
LEQRVVMRYAYDMLGNRIHQLSMEAGARWMLNDVAGKPIRAWDSRGHNFTTKYDALRRPI
EQYVRGTFSDPDPLKPNSDPRTLNPPNETGLLVDNIEYGEPPLNATLAQEAVAQRLNLRT
RIYRHSDSAGVATNARLDANGKPTEAYDFKGNLLRNTRQLVSDYKAIPDWLNNPQLDAET
FEGSTRYDALNRPIQSIAPHSSLGRGKFNVIQPVFNEASLLERMDVWLERAAEPAGLLDA
PDEPPSPVGVADIDYDAKGQRTLIDYKTRDATVIRTTYTYDRETFRLTHLYTRRGVDPAT
VQGVAFTDDCDSPNPPPATVAAPKTPPGGRGCGLQNLHYTYDPAGNITHIRDDAQQTLYF
KNQRVEPSNDYVYDAFYRLIQADGREHLGQAGAPIPHAYNDAGRAGILSANPVGRFAPND
RNAMGRYTERYVYDAVGNFLQMQHARGHDAVVDWTRRYAYAQVSLIEPGKRSNRLSSTVV
GNAAPEPYSHDTHGNMLGMPQLHTMQWDYLDQLQLTQRQKANEADADGVERHGERTWYVY
DASGQRVRKVTELANNGGIKDERIYLGGFEVFRSYQGAAQARTLKLERETLHVMDDKQRI
ALVEMRTLGDEQNTPQRLIRYQFGNHLGSSSLELDEQAQIVSYEEYAPYGSSTYQAVRSQ
TETAKRYRYTGKERDEESGLYYHGARYYAAWLGGWISSDPAELVDGPNTYAYCRSNPVVG
VDPNGTDVVTMHEVVVEGRSQDQIAKDIQAKTGMRAYDASKSAGVAPSTVPGSTWAGDAE
AKLEEAGVIAPHEGPAPIFATDSYSGPTAVPGGGPQPGSMRIETGSGSGITLDPETADRF
RAISKGLEGISPGKDYGITVIEYGETESSPPALTENEVTARIAAAAMLAEAGIDLPSDLE
EYKAPGIERTTEPVALGGVAVLAPIFGKAQRTPTLGHDTKSQEIADEFRADPSVAAVHLN
RSWRRLTGRMFPSTRRPDVTVQFKDGEYFPIEVMSPTDILMGKSSEAGSHDRALVNRTLK
NAPKTATQERYGAITNVRGPELNRMLQRFGVRGRVQWRR
NT seq
8220 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcccgatcgccgtgtctcccggacgtagcggttttggccctcaactctcgctt
tcctatgactccggggcaggcaacggcccctttggcttcggctggagcgtctcgctgccg
gcgatcacccgcaagaccgacaagggcctgccgcaatatctcgacaccgtcgattccgac
gtcttcgtcctttccggcgccgaagatctggtgccggtctatcggcaagaccccgacggc
acttgggtcacccaccacgagggattccatcgagacatggacggagtccactgggtgcgt
gattcatccggccatctggtcgtgcacgaagacgaactcgacggttaccgcgtgcggcgc
taccggccacgcattgaaggactctttgcccgcatcgaacgctggagcaagcacgattcg
cccagcgatgtccattggcgatcgatctccaagaacaacatcctcacgctctacggctat
gacgagaactcgcgtattgccgacccactcgatgcaagccgcatcttctcctggctgatc
tgcgaatcgcgcgacgacaagggcaacggcattcgctatctctataagaaggagaacggc
gactaccaactccggccgggtcaatccgatccgttcaagcaggtttatcagctcaatcgc
ggacttccctccgatcggcgccgcgccgctcagcgctatctgcagcgagtgttgtatggc
aaccgcaagccacttctggatggccagggccagcgcccccggttcctgagcgatctgccc
aactcgccgacggacaccagtgcggactggttgttcgaggtgcgcttcgactacggagaa
ttggacgagggcgatcccttaggccagccggagaagccttggttctatcgccctgatgct
ttctccagctaccgctcaggcttcgaagtgcgcacctgccgccgctgcgagcgggtgcta
atgctgcaccacatccctgatcagcccgcggagccgggcagggcggctcagtccggctac
agaggcgtggtgcgtagcaccgagttcagctacgacgaggaactcgacccaagcctagcg
acccagcacgtctacagcttcctgaaacaggtagtgcaaacggggtggaagcaggaaggc
ggctcaaccatgcgtcgcagcctgcctccggtggagttcgagtacaccgagcctaatgtg
caagagtttgtcgaggaggttgatcaggcaagtctggagaacctccccatcggtctggac
ggcagcgcctaccgttggaccgacctgcacggcgaaggcattcccggcatcctcacagaa
caggccaccgcatggttctacaagcgcaacttgagcccgatcccgcagaagctgcccgac
ggcagcgaacaggtgaaagcccaattcgctccgatcgaaaccgtcgccctcaagcccagc
gtggccctgagcggcggggccgagttcatggacttcgccggcgacggcctgcctgacgtc
gtaatgatggggggcgccacacccggcctatacgaacacgacgaagccgaggggtggcag
tccttccgtccattcgtttcacgcctgaaccgcgatttccgcgatccgaacctaaaattc
attgatctcgatggtgacggccacgccgacgtgcttgtcaccgaagacgatgcttttgtc
tggcacgcgtcattggcggaaattgggtttggacccgcgcgccgggttgcccaggcgctg
gacgaggaaaaaggtccacgtctggtcttctcggatggaacgcaatccatctttctggca
gacatgagcggagacggtctcaccgacctggtgcgcatccgcaacagcgagatctgctac
tggcccaacctcggttactgccgtttcggcgacaaggtcacgatgaccttcgtggacgaa
aacggtcattcagcttgtttcgatcattgcgaccacttcgaccacaagcgcatccgtctc
gccgacatcgatggcagtggcaccgccgatatcatctacctgcatcgtgacggcgtgcgc
ttgtacttcaaccagtcgggcaacggctggagccagcctcaggtgctgaagatcttcccg
cgcatagatgatcttgtaagcatcacgcccgtcgacctgcttggtaacggcacggcatgt
ctggtgtggtcctcgccactggccaacgatgcgcggcggccgatgcgctacgtgaacctg
atgggaggaagaaggtcgggaccggctgcgcacgaacagaacctaacgccgcagaagcct
cacctgctgatcgcagtcaggaacaacctcggcgccgaaacccacatcgactacgcgccc
tccaccaagttctacctgcaggacaagcacgacgggaaaccgtggatcacgcggctgccg
ttcccagtgcacgtggtcgagcgcttggagacctacgaccacatcagccgcaaccgcttc
gtcacccgctacgcctatcaccacggctacttcgacggcgaggagcgcgagttccgcggc
ttcggcatggttgaacaatgggacacggaggtgttctccgctctaaccgaagaggaccta
tcggcggaaaacatagccgccgtgtcgcatgtacccgcggtgcactccaagacctggttc
cacaccggggtctatctgcagcgcgaccgcatctccaactactttgccggactgctggac
gagaaagacaaaggcgagtactaccgtcgtaatccagcgggcgacgctgccgcggatgga
gcctcgtcccggctgttgctgcctgacaccatcctgccggatgacctgaccctcgacgaa
gaacgcgaagcttgccgcgcgctcaagggcgcgatgctgcgccaggaggtctacgccgat
gacggctcgcccaaagccggcatcccctacagcgtgacagagcagagcttctcgatcgag
cgcctgcaggaacgcggcagcaaccgccatgccgtcttcttcacccatgcgcgggaaacg
ctcagctatcactacgaacgcaacgccgacgatccgcgcatccagcatgcgctcacgctg
gaggtggatcgctacggcaacgtcctcaagtccgtggacatcggctatggccgcacaccg
gggcaaagcccactggacggggacgacaaggcaaagcaggaacaaacacacgtcacctac
accgagaaccgcgtcaccaaggccaccgatgacgcggccacccaccaggacgactaccgc
gctccgcttccctgtgaaacgatcacctatgaggtgacaggcctcaagccacgagacgac
gcgccctattttcgtttcgtcgacttcgcgaacgacccagcgtattcgctccccgcgctc
gccacgattccctacgaaacgcccaccaactacgccagcaagcagaaacgcgtcatcgag
cacgttcgcacgctgtaccgcaagaacgacctctcgggcctttcgcaaatgggcgaggtc
gattccatggcattgcccggcgagagctacaagctcgccttcacgcccgggctgctggac
gaagtattcaagcgcccgcgccaagggcaaccggacgaaccgctcctgccggaagcagcg
cgggcaacgatcttgggcggtcagtccggcaaccaaggcggatacgtcgatctggaccgc
aaccgccactggtggatcccttcaggtcggtcgttctaccacccggacgatgtgacagcg
cttgttgaacgggccgaggcatgcgcccattttttcctgccacgtcgctaccgcgatcca
ttcggccaggatgccttcgtcaacttcgacgcccgcgacctcctgatggcggaagcccgc
gatgcgctcggcaaccgcgtcacggtggacgcccacgactaccgtgtgctgcaaccgcgc
ctggtcagcgatccgaaccgcaaccagaccgaagtcgctttcgacaccctcggcatggtg
gtgggcaccgccgtcatgggcaaaccggacgaggccccacggcccggcgacaccctggcc
ggattcaccaccgacctgacgtccgcacaactcgatgccttcgtcgccgccccgtgccag
cccgctgcggaccccgatcgcagcgaagcgaccgccatcgtacatgagcttctgcagggc
gccacaacacgcatcgtctatgacatcgaccgctaccagcgcctgggtgaaccgccgttc
gccgcaaccattgcacgcgaaacccatgtcagcgatctaggccctggcaggaagagccat
ctgcaggtcagcttcagctactccgacggcttcggccgcgagatccagaagaagatcccc
gccgagccgggaccgctcgatgtcaacgacccggcttcgccggtcgtcaacccgcgctgg
gtcggcagcggctggaccatcttcaacaacaagggcaagccggtccgtcagtacgagccc
ttcttcgacgacactcccgccttcaagtttgccgccatccacggcgtcagcccggtgctg
ttttacgatccggccgagcgcgtgatcgccacgctgcacccgaaccacacttacgagaag
gttgtattcgacccctggcaacagaccacctacgacgccaacgacacctgtgcgccgcgt
gccgccccgccgggtgatccgcggccggcacaaaccggcgacccgcgtaccgatcctgac
atcgccggttatgtggccgagtacttcaaggcacagccgccagagtggaagacttgggtt
cagaaaaggatcagcgatccgcagaatccaccctcggactctcgcggccagaaaccggag
agcgacgcagcggtgcgtgcgctcgcccacacagacacgccgacaacggcgcatttcgat
gcgctgggccggccgttcctcaccgtcgctcgcaaccgcgtcgtgtgcaaggcccatccg
ctccatgagaagccggacgaggagttccgcacccgcgtcgagttggacatcgaaggcagc
cagcgcgaggtccacgacgaacgcaagctgcccgacgcggacaaccttccgctcggggcc
ctggagcagcgcgtcgtcatgcgctacgcctacgacatgctgggcaaccgcatccatcag
ctcagcatggaagccggggcgcgctggatgctcaacgacgtcgccggcaagccgatccgc
gcctgggacagccgcggccacaacttcacgacgaagtacgacgcgctacgccgcccgatc
gaacagtatgtgcgcggaaccttcagcgaccccgatccactgaagccgaattcagacccg
cgcacgctgaacccaccgaacgagaccggtctgctggtggacaatatcgaatacggcgaa
ccgccgctcaacgccacgctagcccaggaagccgtggcgcagcgcctcaacctgcgcacc
cgcatctaccgtcactcagattccgctggcgtggcaaccaacgcgcgactggatgccaac
ggcaagccaactgaggcctacgacttcaagggcaacctgctgcgcaacacgcggcagctg
gtcagcgactacaaagccatccctgattggctgaataacccacaactcgacgccgagacc
ttcgagggcagcacccgctacgacgccctcaaccgtccgatccagtccatcgctccccac
agcagcctgggccgcggcaagttcaacgtcatccagccggtgttcaacgaagccagcctg
ctggagcggatggacgtatggctggaacgtgctgccgaaccggccggattgctcgacgcg
ccggacgaaccgccgtcgccggtcggcgtggccgacatcgactacgacgccaaaggccag
cgaaccctcatcgactacaagacccgggacgcgacggtcatccgcaccacctacacctac
gaccgcgagaccttccgcctgacgcatctgtacacgcgccggggtgtggaccccgcaacg
gtgcagggcgtggccttcaccgacgactgcgacagccccaacccgccgccggccaccgtc
gccgcgcccaagactccgcctggcggcaggggctgcggcttgcagaacctgcactacact
tacgaccccgccggcaacatcacccacatccgcgacgacgcgcaacagaccctctatttc
aagaaccagcgcgtcgagccgagcaacgactacgtttacgacgcgttctatcgcctgatc
caggccgatggccgcgagcatctcggccaggccggcgcgccgatcccgcacgcctacaac
gatgctgggcgcgccggcatcctcagcgcgaatccggtcggccgcttcgcgcctaacgac
cgtaatgcgatgggccggtacaccgaacgctacgtctatgacgcggtcggcaactttctc
cagatgcagcacgcgcgaggccatgatgccgtggtggactggacgcgccgctatgcgtac
gcgcaggtcagcctgatcgagccgggcaaacggagtaaccggctgagtagcaccgtcgtc
ggcaatgctgcgccggaaccctacagccacgacacccacggcaatatgcttgggatgccg
cagctgcacacgatgcagtgggactacctcgaccagttgcagttgacgcagcggcagaag
gccaacgaggcggacgcggacggtgtcgagcgccatggcgagcgcacctggtatgtgtat
gacgcttcggggcagcgcgtgcgcaaggtgacggagcttgccaacaacggcggtatcaag
gatgagcgcatctacctcggtgggttcgaagtgtttcgcagctaccaaggtgccgcccaa
gcgcgcaccctgaaactagagcgtgagacgctgcacgtgatggacgacaagcagcgcatc
gcgttggtggaaatgcggacgctcggtgacgagcagaacacaccgcagcgactgatccgc
tatcagttcggcaaccacctcggatcaagcagcctggagttggatgagcaggcgcagatc
gtttcctacgaggaatacgcgccctacggaagctcgacctaccaggcggtgcgcagccag
acggagacagcgaagcgataccgatatacggggaaggaacgggatgaggagagtgggttg
tattaccacggggcgaggtattacgcggcgtggctggggggatggatcagctctgatccg
gcagaactcgtcgatggcccgaatacctacgcatattgccgatcaaatcctgttgtcggt
gtcgacccgaatggaaccgatgtcgtaacgatgcatgaagtagtggtcgaagggcgcagc
caggatcagatagccaaagatattcaggcaaagaccggaatgcgtgcttatgacgccagt
aaatctgccggcgtagcgccaagcacggtgccgggatcgacatgggcgggggacgccgaa
gcaaaacttgaagaagccggtgtgattgcaccgcatgaaggccccgcacctattttcgca
acagactcgtacagtggaccaactgctgttcccggcggcggaccgcagcctggatctatg
cgcatcgagacgggatctggctctggcatcacgctcgatccggagactgccgatcgattt
cgagccatatccaaagggttggagggaatcagccctggcaaggactatggaattactgtc
atcgaatatggtgaaacagaatcttcgccgcccgccctaacagagaatgaagtgacggca
cgcatagcggcggccgccatgcttgcagaagcggggatagatcttccctcagatctcgaa
gagtacaaggctccaggtattgaacggactacggagcccgtcgccttgggtggagtggca
gtgctcgcgcccatctttggaaaggcgcaaagaaccccgactctagggcacgatactaaa
agccaagaaatagccgacgagttccgcgcggatcctagcgtcgctgcggttcacctaaac
cggtcttggcggcgcctcacaggtaggatgtttccctctaccagaagaccggacgtgact
gttcagtttaaggacggagagtatttcccaatcgaagtaatgtctcccaccgatatccta
atgggaaagtcgagcgaagctggttcccatgatcgtgccctagtcaaccggacattaaag
aacgctccaaagactgcgacacaggagaggtacggggcgatcactaacgtcagaggaccc
gaactcaatcggatgcttcagcgtttcggagtacgggggagagtgcaatggcggcggtga
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