Labrenzia sp. PHM005: FJ695_03125
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Entry
FJ695_03125 CDS
T06152
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00521
Streptomycin biosynthesis
labp00523
Polyketide sugar unit biosynthesis
labp00541
O-Antigen nucleotide sugar biosynthesis
labp01100
Metabolic pathways
labp01110
Biosynthesis of secondary metabolites
labp01250
Biosynthesis of nucleotide sugars
Module
labp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FJ695_03125 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FJ695_03125 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FJ695_03125 (rfbC)
Enzymes [BR:
labp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FJ695_03125 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QDG74937
UniProt:
A0A4Y6RRF5
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Position
complement(680354..680932)
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AA seq
192 aa
AA seq
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MSGTVILVHPRRFGDDRGWFTECYNKQKFEPLGIDCEFVQDNHSLSVPAGTLRGLHFQTP
PFAQDKLVRCIRGKIFDVAVDIRKGSPTYGEWVGVELSAENGDQLLVPAGYAHGFVTLED
NTEVTYKVSNYYAPDNDAGLMWNDKDIGIDWPLAGGAEPVLSGKDTKHPALAEFDSPFAY
DGNPMKLVEIEP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacagtaattttagttcatccgcgtcgatttggtgatgaccgtggctggttt
accgaatgctacaacaaacagaagtttgagccgctcggaattgactgcgagttcgtacag
gacaatcactcgctttctgtgccagccggcacgttgcgcggcctgcatttccaaaccccg
ccgtttgcgcaagacaagctggtgcgctgtatccgcggcaaaatctttgatgtcgctgtc
gatatccgcaagggttcgcctacctatggcgagtgggttggcgtggaactgtctgccgaa
aacggcgatcagctgctggtcccggcaggttacgcccatggctttgtgactttggaagac
aacaccgaagtcacctacaaggtctccaactactatgctccggacaatgatgccgggctg
atgtggaacgataaagacatcggcattgactggccgctggcaggtggggctgagccggtt
ctgagcggcaaggacaccaaacatccggcgcttgcagagtttgactcgccttttgcctat
gacggcaatccgatgaagctggtcgagatcgagccgtaa
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