KEGG   Lactobacillus acidophilus NCFM: LBA0232
Entry
LBA0232           CDS       T00231                                 
Name
(GenBank) RNA polymerase delta subunit
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
lac  Lactobacillus acidophilus NCFM
Pathway
lac03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LBA0232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lac03021]
    LBA0232
   03400 DNA repair and recombination proteins [BR:lac03400]
    LBA0232
Transcription machinery [BR:lac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LBA0232
DNA repair and recombination proteins [BR:lac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LBA0232
SSDB
Motif
Pfam: HARE-HTH DUF3632 TPR_20
Other DBs
NCBI-ProteinID: AAV42127
UniProt: Q5FME7
LinkDB
Position
228791..229345
AA seq 184 aa
MGLDKFKDKNRDELSMIEVARAILEDNGKRMAFADIVNAVQKYLNKSDEEIRERLPQFYT
DMNTDGEFISMGENVWALRSWFPYESVDEEVNHPEDEEEDDSRKHHKKVNAFLASATGDD
DIIDYDNDDPEDDDLDAATDDSDDDYSDDDSDYDEDNDDADDVLPDGIEGQLSQLNDEDD
DEDD
NT seq 555 nt   +upstreamnt  +downstreamnt
gtgggattagacaaatttaaagacaaaaaccgcgatgaattgtcaatgatcgaagttgct
cgcgcaattttggaagacaatggcaagagaatggcatttgctgacattgttaatgccgta
caaaaatacttaaataagagtgacgaagaaattcgtgaacgtttgccacaattctatact
gatatgaacactgatggtgaatttatttctatgggtgaaaatgtttgggctcttcgctca
tggttcccatatgaatcagttgatgaagaagttaaccacccagaagatgaagaagaagac
gattcacgtaagcaccacaagaaggttaatgccttcttggcaagtgctaccggtgacgat
gatatcatcgactacgacaatgatgatccagaagacgatgacttagacgcagccactgat
gatagtgatgatgactacagtgatgacgattctgattatgatgaagataatgatgatgct
gatgacgtattgccagacggtatcgaaggtcaattgtcacaattaaacgatgaagatgac
gacgaagatgattaa

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