Lacibacter sediminis: H4075_16520
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Entry
H4075_16520 CDS
T06746
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lacs
Lacibacter sediminis
Pathway
lacs01501
beta-Lactam resistance
lacs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H4075_16520
01503 Cationic antimicrobial peptide (CAMP) resistance
H4075_16520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lacs02000
]
H4075_16520
01504 Antimicrobial resistance genes [BR:
lacs01504
]
H4075_16520
Transporters [BR:
lacs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H4075_16520
Antimicrobial resistance genes [BR:
lacs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H4075_16520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF1077
Motif
Other DBs
NCBI-ProteinID:
QNA43670
UniProt:
A0A7G5XDW7
LinkDB
All DBs
Position
3888594..3891692
Genome browser
AA seq
1032 aa
AA seq
DB search
MTISELSLKRPVLAIVMNIMIVLFGVIGFRFLGIRDYPAIDPPNISVRTSYPGANADVIE
SQITEPLEKSINGIAGVKNITSSSSQGNSNINVEFELGFNLEEAANDVRDKVSQTVRSLP
ADLDAPPVVTKADASSDPILSMTIQSESRNPLQVTEYATNNLLERIQTIPGVSTVNIWGE
KRYAMRIWFEPEKLLSYKLTAKDVQTALQRENLELPSGKISGNSMELTVRTFGRLTTEED
FNNLIVANIEGRDIKLKDVGQVVLGPENEESGLKESGTPMIALAIVPQPGSNYVAIADEF
YKRYEQIKKEVPADITLDVGMDQTKFVRKSIAEVEETLVLSFALVVLIIFLFFRDWIVAI
RPLIDIPVSLIGAFFIMYLSGFTINVLTLLAIVLATGLVVDDGIVVTENIFKKMEQGMDK
YKAAREGSKEIYFAVIATSITLAVVFLPIIFLEGFVGRLFREFGIVVAGAVLISAFVSLT
LTPVLNVYLTRKGGTRHGWFYRVTEPFFTGMERGYHKLLIGFMRVRWVALILIIACFGII
WMIGNSLQSELAPMEDRSQFRLQVSAPEGTSFEAMDAYIDKLNQLVLDSVPENKVLISVT
APGFTGAGSVNSGFVRSLLVDPDERDRSQQEIVDVINRNLPKYNEGRAFAIQEQTISVNR
RGGLPVAFVVQNNNFDKLKEVLPKFLEEAQRNPVFSSVDVDLKFNKPELRLNIDRLRASE
LGVSVTDISELMQLSLSNRRLGYFIKDGKQYQVIGQVLRDDRDDPTDLKNLFVRNASGQM
ISVDQFVSFEEETTPPTLYHFNRYKSATISAGLAPGKTIGDGIKEMEAIADKLLDESFNT
ALSGNSRDFAESSGNTFFALGLALILIFLVLAAQFESFIDPLVIMFTVPLAIAGALFSLW
LFDQTINIFSQIGMIMLIGLVTKNGILIVEFANQKKHAGMLKKPAVIEAATMRLRPILMT
SLAMALGALPLALSLGAASTSRIPLGIVIVGGIMFSLVLTLFVIPAMYSYLSSKKIKVHE
EETEAAISKLSD
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgactatttccgaactgagtttgaagcgacccgtgctggccattgtgatgaacatcatg
atcgtattgtttggcgtcatcgggtttcgtttcttaggtattcgtgattacccggcaatt
gatcctcccaatatcagtgtacgtacttcataccccggtgcaaatgccgatgtaattgaa
tcgcagatcacagaaccgttggagaaatcgatcaacggtattgcaggcgtaaaaaatatt
acgagcagcagcagccagggtaacagcaatatcaatgttgagttcgaattaggttttaat
cttgaagaagcagcaaatgatgtgcgtgataaagtatcacaaacagttcgttcactccct
gccgatcttgatgccccacctgttgttacaaaagcagatgccagcagtgatccgattctt
tccatgactattcaaagtgagagcaggaatcctttacaggtaacagaatatgcaacaaac
aatttactcgaacgcatacaaaccattcccggtgttagtactgtgaatatctggggtgaa
aaaaggtatgctatgcgtatctggtttgaacccgaaaaactattatcatacaagctaact
gcaaaagatgtgcagacggcactgcaacgtgaaaacctggaattgccctccggtaaaatt
tcaggtaactccatggagttaaccgttcgcacgttcggtcgattaacaacagaagaagat
ttcaataatctcattgttgcaaatatagaagggcgtgatattaaattaaaagacgtagga
caggttgtacttggcccggagaatgaagaaagtggtttgaaagaaagtggaacgccaatg
atcgccctggcaattgttccgcaaccgggcagtaactatgttgctattgccgatgaattt
tataaacgttacgaacagatcaaaaaagaagtacctgcagatattacacttgatgtgggt
atggatcaaacaaaatttgtacgtaaatccattgcggaagtagaggaaacacttgtactt
tcttttgcattggtggtgcttattatcttcctctttttccgtgactggatcgttgcgatc
cgtccgttgatcgatattcctgtttcattgatcggtgcattctttattatgtacctgagc
ggctttaccattaatgtacttacgcttcttgctattgtattggcaacaggtttggtggtg
gatgatggtattgtggtaacagaaaatatctttaagaaaatggaacagggcatggataaa
tacaaggctgcccgtgaaggttccaaagaaatttatttcgccgttattgcaacctccatc
acattagcagtagtatttcttccaatcattttcttagaaggatttgtgggtcgtttgttc
cgtgagtttggtattgtggtagcaggtgcggtattaatttctgcatttgtatcacttacc
ttaacacctgtactcaacgtttatttaacccgcaaaggcggtacaaggcatggctggttc
tatcgtgtaacagaaccattctttaccggtatggagcgtggataccataaactgcttatt
ggttttatgcgtgtaagatgggtggcactgattttaatcatcgcttgttttggtatcatc
tggatgattggtaattcactgcaaagcgagcttgcaccaatggaagaccgaagccagttc
cgcttacaggtaagtgctcccgagggaaccagttttgaagcaatggatgcttatatcgat
aaacttaaccagcttgtattggatagtgtgcccgaaaataaggtactcatctccgttact
gcaccgggctttaccggagcaggatcggtaaacagtggttttgttcgttcattgcttgtt
gatcctgatgaacgtgatcgttcacaacaggagatcgttgatgttatcaatcgaaatttg
ccaaagtataatgaaggaagagcttttgccatccaggaacaaactatttcagtaaaccgc
cgtggtggtttaccggttgcgtttgttgtacagaataacaattttgataaattgaaagaa
gtattgccgaagttcctggaagaagcccagcggaatcctgtgttttccagtgttgatgtt
gaccttaaattcaataaacctgaactgcgtttaaatattgatcgtttacgtgcaagtgag
ttaggtgtaagtgtcaccgatatttcagaattgatgcagttatcgttgagtaacagaaga
cttggttactttattaaagatggtaaacagtaccaggtaattggccaggtattaagagat
gatcgtgatgatccaaccgatctgaaaaatcttttcgttcgcaatgcttcaggacaaatg
atctctgttgatcaattcgtaagttttgaagaagaaacaacaccaccaacgctttaccat
ttcaaccgttataaatcagcaacgatcagtgcaggtttagcaccgggtaaaacgattggt
gatgggattaaggaaatggaagccattgctgataagttgctcgatgaatcgttcaacaca
gcactgtctggcaactcaagagattttgctgagagcagtggtaatacatttttcgcattg
ggtcttgcattgatattgatcttccttgtattggctgcacagtttgaaagttttattgat
ccgttggtgatcatgtttacggtaccattggctattgccggtgcattattctcattgtgg
ttgttcgatcaaaccatcaatatcttttcacaaattggtatgatcatgttgatcgggctt
gtaaccaagaacggtatcctgatcgttgaatttgccaatcagaaaaaacatgccggcatg
ttgaagaagcctgcggttattgaagcagccaccatgcgtttgcgtcccatcttaatgacg
agcctggctatggcactcggtgcattaccattggccttgtcgttaggtgcagcatcaaca
agccgtattccgttgggtatagtaatcgttggtggaattatgttttcgttggtattgaca
ctgtttgtcattcctgcaatgtattcgtacctgtcatccaaaaaaattaaagtgcatgaa
gaagaaactgaagctgctattagcaagttgtctgattaa
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