Lacibacter sediminis: H4075_20365
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Entry
H4075_20365 CDS
T06746
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lacs
Lacibacter sediminis
Pathway
lacs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4075_20365 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacs03400
]
H4075_20365 (uvrB)
DNA repair and recombination proteins [BR:
lacs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4075_20365 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H4075_20365 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
DUF87
AAA_30
Kinesin
Microtub_bd
SWI2_SNF2
AAA_22
ABC_tran_CTD
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QNA44389
UniProt:
A0A7G5XFY6
LinkDB
All DBs
Position
complement(4814704..4816746)
Genome browser
AA seq
680 aa
AA seq
DB search
MQMPFQLHSPYSPSGDQPQAIQQLTEGILNGEKYQTLLGVTGSGKTFTMANVIQNVQRPT
LVLTHNKTLVAQLYGEFKQFFPDNAVGYFVSYYDYYQPEAYMPVSGTYIEKDLSINEELD
KLRLQATSELLSGRRDIIVVASVSCIYGMGNPVDFENGIIRIQKKQTLSRQGFLHSLVNS
LYSRTQGDFTRGTFRVKGDTVDINLPYVDFGYRISFFGDEIEEIETIDIKSGKRIGKVEN
AAIFPANLYIAPKDQMQQIIYEIQDEAAAQVEYFKREGKYIEAQRLKERTDYDLEMIREL
GYCNGIENYSRFFDRRTPGTRPFCLLDYFPKDYLMVIDESHQTIPQVSGMYGGDRSRKLV
LVDYGFRLPSAMDNRPQNFHEFESLLNQVVFVSATPDDYELEKTGGVVVEQVVRPTGLLD
PPIEIRPSVNQIDDLLDEIDKRVKKGDRVLVTTLTKRMAEEMDKYLKRINIKSKYIHSEV
DTLERIEILRDLRLGVIDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRNEKSLTQTAG
RAARNVDGLVIFYADKMTESMRRTIEETSRRREKQIQYNIEHGITPRTIKKSIEQVMGQT
AVLDIKGYDPAKSYALAPDGELVEAAEDQEIYQTIPQMEKAIARTKKQMEKAARDLDFME
AARLRDEMFRLQKELDTMKK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttgcagatgccttttcaacttcattcaccttattctccctccggcgatcagccgcaggct
attcaacagcttaccgaaggaattttaaacggggagaaataccaaaccttacttggtgta
acaggtagtggtaaaacatttaccatggccaatgtgatccagaatgtacaacggccaacg
cttgtgcttacacataacaaaacattggtggcgcagttgtatggtgagttcaaacaattc
tttcctgataatgctgtgggttattttgtaagctattacgattactatcaacccgaagca
tatatgcctgtgagtggtacctacattgaaaaagatctcagcataaacgaagagcttgac
aaactgcgtttacaggctaccagtgaattgttaagcggacgaagagatattattgtggta
gcgagtgtgagttgcatttatggtatgggtaacccggttgattttgaaaatggcatcatc
cgtattcaaaagaaacagacactttcacgacaaggctttctgcattcattggtgaatagt
ttatacagccgcacacaaggtgattttacaaggggtacatttcgtgtaaaaggcgatacc
gttgatattaatcttccttatgtcgatttcggttaccgcatcagtttttttggtgatgaa
attgaagagatcgaaaccattgatatcaaatcaggaaaacgaattggtaaagttgagaac
gctgccatcttcccggccaacttatacatcgcaccaaaagaccagatgcaacagattatt
tatgaaatacaagacgaagcggctgcacaggttgagtactttaaacgtgaaggcaaatac
attgaagcgcaacgattgaaagaacgcaccgattatgatctggagatgatccgtgagctt
ggttattgcaacggtattgaaaactattcccgattttttgatcgacgtacgccaggtaca
agaccgttctgtttgctggattatttcccgaaggattatttaatggtcattgatgaaagt
catcaaaccattccgcaggtaagtggtatgtatggtggcgacagaagcagaaaactggta
ttggttgattatggttttcgtttaccgagtgcaatggataaccgtccgcagaactttcac
gagtttgaaagtttgctcaaccaggttgtgtttgttagtgctactcctgatgattatgaa
ttagaaaaaacaggtggtgtggtagtagagcaggttgttcgtccaacaggtttgttggat
ccgccgatcgaaatccggccaagtgtaaaccagatcgacgatctgctggatgaaattgat
aagcgggtaaagaagggtgatcgtgtattggttacaacattaaccaaacgtatggcagaa
gaaatggacaaatacctgaagcggatcaatatcaaatcaaaatatattcatagcgaagtg
gacacgttggagcgaattgaaattttgcgtgatctccgcttgggcgttattgatgtgttg
gtgggtgtaaacctcttgcgtgaaggattggatttacctgaagtatcgctcgttgcaatt
cttgatgcagataaggaaggattcctgcgtaatgaaaaaagtttaacacaaaccgctggt
cgtgctgcacgtaatgtcgatggattggtgatcttttatgctgataagatgacggagagc
atgcgccgcaccattgaagaaacaagcagacgaagagaaaaacagatccagtataacatt
gaacacggcattacaccacgtaccatcaaaaaaagtattgaacaggtgatggggcagacg
gctgtgcttgatattaaaggctacgatcctgcaaaatcatatgcgcttgctcccgatggt
gaattagtagaagcagccgaagaccaggaaatatatcaaactattccgcaaatggagaaa
gcgattgccagaaccaagaagcaaatggaaaaagcagcacgtgacctggattttatggaa
gctgcacgtttacgggatgaaatgttcagattacagaaagaactggacacaatgaagaaa
tag
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