Legionella adelaidensis: NCTC12735_01384
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Entry
NCTC12735_01384 CDS
T07063
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ladl
Legionella adelaidensis
Pathway
ladl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ladl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12735_01384 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ladl03400
]
NCTC12735_01384 (mfd)
Enzymes [BR:
ladl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12735_01384 (mfd)
DNA repair and recombination proteins [BR:
ladl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
NCTC12735_01384 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
MFD_D3
SNF2-rel_dom
ERCC3_RAD25_C
UB2H
DUF1474
Motif
Other DBs
NCBI-ProteinID:
VEH85749
UniProt:
A0A0W0R5C6
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All DBs
Position
p22:complement(954..4403)
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AA seq
1149 aa
AA seq
DB search
MNKFVLLPEKVASKQHWGQLYGSSLPLALAEYCQSLTGVKLVVAPDNLTASQLQAELQFF
LPQNKQEILMFPDWETLPYDQFSPHQDIVSERLYTLSRLQQTTNAIVISAANTLMHRLPP
PAFLNQHGLVLKKGQTINIEAFRHQLQESGYYCVNKVLEHGEFAIRGAIIDLFPMGSNAP
FRIELFDDEVESLRLFDPESQRTIEKIDEIQVLPAREFPLNEKSISQFRKTFRENFSGNP
SQCPIYENVSNGTFPNGIEYYLPLFFHETATIFNYLPPEATLCLIGEIQERAEQFWLEVN
SRFEQRNFDISRPILAPQKVFLNPTDLLTFINQYQQIRLSHTPSEKKGALNFATEKAKEF
PIERQSKEPLMHLAKFMSDPSKRYLLVVESAGRREVLIDLLRQSNMVPKIQPSWHVFLED
SSSLNIIIGSLMQGTDLPQAKISLIVEGQLFGEQAIPQRRTAQKTIDPDLVIRDLAELRI
GAPVVHLQFGVGRYLGLETIQDQNNANEFLVLAYAGEDKIYVPVTGLHNISRYTGADSEH
APLHRLGSDQWQKEKKKAAEKIHDVAIELLDVYAKREAKPGFTYQFDQSDYQRFASGFPF
AETVDQQQAIQQIIRDMQSPRPMDRLICGDVGFGKTEVAMRAAFLAVQNGRQVCVLVPTT
LLATQHFETFRDRFAEFPVNIELLSRFRSGKESEKVIADLKNGKIDIVIGTHKLFQKDIS
FHNLGLLIIDEEHRFGVKQKEYIKAMRTEVDILSMTATPIPRTLNMAMAGIRDISLIATP
PAKRLAIKTFWQERNDAVLREAILRETLRGGQVFFLHNNVQTIERVAQDIQNLVPESKVR
SAHGQMRERELEHIMSDFYHHRFNVLVCTTIIETGIDIPTANTIIIDRADKFGLAQLHQL
RGRVGRSHHQAYAYLLTPNDKLLSADAVKRLEAIVSLEDLGAGFTLATHDMEIRGAGELL
GEDQSGNIEAIGFTLYMEMLDKAVADLKAGKTPEMSAPLYQGPEIDLRISAIIPEDYIGD
VHTRLIMYKRIANAKNKEELRELQVEMIDRFGLIPLSVKHLLLITEMKLFAAELGILRIN
ASQQQGRIEFGENPNINAKALITLIQVQPKTYQLDGPSRLRFTLEKENTIERIHEINSLL
GKLAPASQM
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtttgttctccttcccgaaaaagtagcttcaaaacaacactgggggcaactc
tacgggagtagcttacctttggctcttgcagaatattgccaatccctaacaggagtgaaa
ttagtcgttgcgccggataatttaaccgcttcccagcttcaggcagaattgcaattcttt
ttaccccagaataagcaagaaatactaatgtttccagattgggaaacattaccttatgat
caattttctcctcatcaagatattgtttcagaacgcctctacacattgagtcgattgcaa
caaactaccaatgcaattgtcatcagtgcagctaatacacttatgcatcgccttcctcct
cccgcctttttaaatcagcacggattggtattaaaaaaagggcaaacaattaatattgaa
gcttttcggcatcagttgcaggaatcaggttattattgtgttaataaagtattagaacat
ggggaatttgctatccgtggagcgattattgatctttttcctatgggtagcaatgcacct
tttcgcattgaattatttgacgatgaggtagagagcttacggttatttgatccggaaagt
cagcgaaccattgagaaaattgatgaaattcaagttctccctgcacgtgaatttccctta
aatgagaaaagtatttctcaatttagaaaaacctttagagaaaattttagtgggaaccca
agccaatgccctatctatgaaaatgtgagcaatggaacttttcccaatggtatagaatat
tatttacctctcttttttcatgaaacagccactatttttaattatcttcccccagaagcg
acgctttgcctgataggagaaattcaggagagagcagagcaattttggttggaagtaaat
agccgttttgagcaaagaaattttgatatttctcgtcctattctcgctccacaaaaagtt
tttttaaatcctaccgatttgttaacttttattaatcaataccagcaaattcgtttatcc
cacactccttcagaaaaaaaaggcgcgctcaattttgccactgaaaaagcaaaagaattt
cctattgaaagacagtctaaagaacctttaatgcacttagctaaattcatgagtgatcca
tcaaaacgctacttgttagtagttgaaagcgcggggcggcgtgaagttcttatcgatttg
ctaagacaaagtaatatggttccaaaaattcaacccagttggcatgtatttcttgaagac
agttccagcttaaatattataattggttccctgatgcaaggaaccgatctgccccaagca
aaaatttccctgattgtggaggggcaactttttggcgagcaagcaatccctcagagacgt
actgcacaaaaaactatagaccctgacttagttattcgtgatttagcagaacttcgtatt
ggagcgcctgttgtgcatttacaatttggcgtgggacgctatttaggtttagaaactatt
caagatcaaaacaatgccaatgagtttctggttttagcatacgcgggtgaggataaaatt
tatgtcccagtaaccggattacataatattagtcgctacacaggcgctgatagcgagcat
gccccgttgcatcgtttaggttccgatcagtggcaaaaagagaagaaaaaagcagcggag
aaaattcatgatgtagctattgagctacttgatgtatacgctaaacgagaagccaagccg
ggctttacctatcagtttgaccaaagtgattatcaacgttttgccagcggttttcctttt
gccgaaacagttgatcagcaacaagccattcaacaaattataagagatatgcaatcacca
cggcccatggatagacttatttgtggggatgtaggctttggcaaaacggaagttgctatg
cgagcagcttttctcgcggtacaaaatggcaggcaggtttgtgtattagttcctacgact
ttattagctacgcaacatttcgaaacattccgtgatcgatttgccgaatttcctgtaaac
attgaattactgtcgcggtttcgcagtgggaaagaatcagaaaaagttattgctgattta
aaaaatggcaaaattgatatcgtaattggaacccataagctttttcaaaaagatatctcc
tttcataatttaggattattaattattgatgaagaacatcgatttggcgtaaaacaaaag
gaatatattaaagccatgcgcactgaagtagacatcctgtctatgactgcaacccccatt
ccaagaacccttaatatggctatggcgggtattcgggatatttcacttattgctaccccc
cctgctaaacgattagccataaaaaccttctggcaagaaagaaatgatgccgttttacgc
gaagctattcttagggaaactcttcgtggaggccaggtatttttcttgcataataatgtg
caaaccattgagcgggttgcgcaagacattcaaaatttagttccggaatcaaaggttaga
agtgcccatgggcaaatgcgagagcgtgaactggaacatattatgtctgatttttatcat
catcgatttaacgttcttgtttgtacaactatcattgaaaccgggatcgatattcctacc
gccaacaccatcattattgatagagcagataagtttggacttgcccaattgcatcaatta
cgaggacgagtaggccgctcgcatcaccaagcgtatgcttatcttttaacaccgaatgac
aagcttttaagcgcagatgcggttaaacgcctggaagccattgtatccttggaggattta
ggcgcaggttttactttggccacccatgacatggaaattcgcggtgccggggagctcctc
ggtgaagatcaaagcggaaatattgaagctattggttttaccttatatatggaaatgtta
gacaaagcagtggcagatttgaaagcgggaaaaacacccgaaatgtccgcgcccctatat
caaggaccagaaattgatttacggataagtgcgattatcccagaagattatattggtgat
gtccatacccgtttaattatgtataagagaatagccaatgcaaaaaacaaagaagaatta
cgagaattgcaagtagaaatgattgatcgttttggtttaatacctctttccgtaaaacat
ttattgttaattactgaaatgaaactctttgcagcagaattaggaatactgcgcattaac
gcttcgcagcaacaagggagaatagaatttggtgagaatccaaatattaatgcgaaggct
ttaataaccctgattcaagtgcagccaaaaacttatcaattagatggacccagtcgtttg
cgttttacattggaaaaggaaaacaccattgagcgtatacatgaaattaatagtcttcta
ggcaaactcgcaccagcatcccaaatgtga
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integrated database retrieval system
