Luteibacter aegosomatis: L2Y94_01775
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Entry
L2Y94_01775 CDS
T09054
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
laeg
Luteibacter aegosomatis
Pathway
laeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2Y94_01775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laeg03019
]
L2Y94_01775
Enzymes [BR:
laeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L2Y94_01775
Messenger RNA biogenesis [BR:
laeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L2Y94_01775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
HEM4
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UPG86119
LinkDB
All DBs
Position
409610..411322
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AA seq
570 aa
AA seq
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MSETVLTDVFYENLDLHPLLHQGLAAAGITRCTPIQALTLPLALTGRDVAGQAQTGTGKT
FAFLVALVDRLLKNPAQPGRRDADPRALVIAPTRELAIQIEKDFQTIGKATGLRSALIYG
GVDYDKQRQQLRDGCDIIIATPGRLLDYHKQDVFGFGSVEIMVIDEADRMFDLGFIKDVR
FIFRRLPAREKRQVLLFSATLSHRVLELAYEHMHEAEKLVVETENVTADRVRQVVYFPSK
EEKMPLLLNLLEESKAERSIIFVNTKAAAERITDRLKRHNFRVGAISGDVPQVKRQKLLQ
RFQAGDIDLLVATDVAARGLHIPAVSHVFNYDLPQDAEDYVHRIGRTARLGAEGDAISFA
CDLYAMGLPDIETYINQKIPTASIDAKMLVMPAPRPRADGVQDEVDDPNDTDGHVPTRGA
PPEKGGRSGSRGGRGGPRSGERSGSRERKPRPPREDKPASTEVPVKTVVVADTVSELPAA
AEAMAAASAPKKRRRRRGGRGRGQREGGENVAATPNARPQGEARPSHSPQGQRPSRQVTA
SRPASTPAPVAPVKEKVGFFRRLGRLFGGN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaccgttcttaccgacgtcttctacgagaacctcgacctccatccgctgctc
caccagggcctcgccgccgcgggcatcacccggtgcacgccgatccaggccctcaccctg
ccgctggcgctcaccggccgcgacgtcgccggccaggcccagaccggcacgggcaagacc
ttcgccttcctcgtggcgctggtcgaccgcctgctgaagaaccccgcccagcccggccgc
cgcgacgccgatccgcgtgccctggtgatcgcacccacccgcgagctggcgatccagatc
gagaaagacttccagaccatcggcaaggccaccggcctgcgcagcgccctgatctacggc
ggcgtcgattacgacaagcagcgccagcagctgcgcgacggctgcgacatcatcatcgcc
acgccgggccgcctgctcgactaccacaagcaggacgtcttcggcttcggcagcgtcgag
atcatggtcatcgacgaagccgaccgcatgttcgacctgggcttcatcaaggatgtgcgc
ttcatcttccgccgcctgccggcccgcgagaagcgccaggtgctgctgttctcggccacc
ctcagccaccgcgtgctggaactggcctacgagcacatgcacgaggccgaaaagctcgtg
gtcgagaccgaaaacgtcacggccgaccgcgtgcgccaggtggtgtacttcccctcgaag
gaagagaagatgcccctgctgctcaacctgctcgaagagagcaaggccgagcgcagcatc
atcttcgtcaacaccaaggccgccgccgagcgcatcaccgatcgcctgaaacgccacaac
ttccgcgtgggcgccatttccggcgacgtgccgcaggtgaagcgccagaagctgctccag
cgcttccaggccggcgacatcgacctgctggtggccaccgacgtggccgcccgcggcctg
cacatcccggcggtgagccacgtcttcaactacgacctgccgcaggatgccgaggattac
gtgcaccgcatcggccgcaccgcgcgcctgggcgccgagggcgacgccatcagcttcgcc
tgcgacctctacgcgatgggcttgccggacatcgagacttacatcaaccagaagattccc
accgcgtcgatcgacgcgaagatgctggtgatgcccgcgccgcgcccgcgcgccgatggc
gtgcaggacgaggtcgacgatcccaacgataccgatggccacgtgcccacccgcggcgcg
ccgccggagaagggcggccgttcggggtcgcgcggcggccgtggcggtccgcgctcgggc
gagcgttcgggcagccgcgagcgcaagccgcgtccgccgcgcgaggacaagccggcgtcg
accgaagtgccggtgaagaccgtggtggtcgccgacaccgtgtccgagctgccggccgcc
gccgaggcgatggccgccgcgtcggcaccgaagaagcgccgtcgccgtcgtggcggtcgc
ggtcgcggccagcgcgaggggggcgagaacgtcgccgccacgccgaacgcgcgtccgcag
ggcgaggcccgtccgtcgcattccccgcagggccagcgtccgtcgcgccaggtgaccgcc
agccgaccggccagcacgccggcaccggtggctccggtgaaggaaaaggtcggcttcttc
cgccgcctgggccgcctgttcggcggcaactga
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