Luteibacter aegosomaticola: L2Y96_02200
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Entry
L2Y96_02200 CDS
T09073
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
laes
Luteibacter aegosomaticola
Pathway
laes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2Y96_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laes03019
]
L2Y96_02200
Enzymes [BR:
laes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L2Y96_02200
Messenger RNA biogenesis [BR:
laes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L2Y96_02200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
HEM4
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UPG90606
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All DBs
Position
491844..493598
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AA seq
584 aa
AA seq
DB search
MSQTVLTDVFYENLDLHPLLHQGLATAGITRCTPIQALTLPVALTGRDVAGQAQTGTGKT
FAFLVALMDRLLRNPAAADRKDSDPRALIIAPTRELAIQIEKDFQTIGKGTGLRSALIYG
GVDYDKQRQQLRDGCDIIIATPGRLLDYYKQDVFGFGSVEVMVIDEADRMFDLGFIKDVR
FIFRRLPAREKRQVLLFSATLSHRVLELAYEHMHEAEKLVVETENVTADRVRQVVYFPSK
EEKMPLLLNLLEESKAERSIIFVNTKAAAERITDRLKRHNFRVGAISGDVPQVKRQKLLQ
RFQDGQIDMLVATDVAARGLHIPAVSHVFNYDLPQDAEDYVHRIGRTARLGAEGDAISFA
CDLYAMGLPDIETYINQKIPTASIEARMLVMPAARPRADGVQDEVEDPNDTGGHVPTRGA
PPEKGGRGGRDGQRSGSRSGSRSGPRSGERSGNRERRPRQDAPATGSTEVPVKTVVVAET
VADLPAAAEAMAADSAPKKRRRRGGRGRGRREGGAEGAPQVRIQDNNTAATPRAAGAEGA
QANGNRRPSRHVAASRPAATPAPAAAPAKKEGFFRRLGRIFGGK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaccgtacttaccgacgtcttttacgaaaacctcgacctccatccgctcctg
caccaggggctcgccaccgccggcatcacccgttgcacgcccatccaggcgctgaccctg
cccgtggccctgaccggccgtgatgtcgcaggccaggcccagaccggcaccggcaagacc
ttcgcgttcctcgtggcgctgatggatcgcctgctccggaacccggccgcggccgaccgc
aaggattcggacccgcgcgccctcatcatcgcgcccacccgcgaactggccatccagatc
gagaaggatttccagacgatcggcaagggcaccggcctgcgcagcgccctgatctacggc
ggcgtcgattacgacaagcagcgccagcagctccgcgacggctgcgacatcatcatcgcc
accccgggccgcctgctcgattactacaagcaggatgtcttcggcttcggcagcgtcgag
gtcatggtcatcgacgaagccgatcgcatgttcgatctcggcttcatcaaggacgtgcgc
ttcatcttccgccgcctgccggcccgcgagaagcgccaggtcctgctgttctccgccacc
ctgagccaccgcgtgctcgagctggcctacgagcacatgcacgaagccgaaaagctcgtg
gtggaaaccgagaacgtcacggccgaccgcgtccgccaggtggtctacttcccttcgaag
gaagaaaagatgccgctgctgctgaacctgctcgaggagagcaaggccgagcgcagcatc
atcttcgtgaacaccaaggccgccgccgagcgcatcaccgaccgcctgaagcgccataac
ttccgtgtcggcgccatctcgggcgacgtgccgcaggtgaagcgccagaagctgctgcag
cgcttccaggacggccagatcgacatgctggtggctaccgacgtcgccgcccgcggcctg
catatcccggccgtcagccacgtcttcaactacgacctgccgcaggatgccgaggactac
gtccaccgcatcggccgtaccgcgcgcctgggtgccgaaggcgatgccatcagcttcgcc
tgcgacctctacgcgatgggcctgccggacatcgagacctacatcaaccagaagatcccg
accgcttcgatcgaagcgcggatgctggtgatgccggcggcgcgcccgcgtgccgacggc
gtgcaggatgaagtggaagatccgaacgacaccggcggccacgtgccgacccgtggcgcg
ccgcccgagaagggtggccgcggtggccgtgatggccagcgttcgggttcgcgctcgggt
tcgcgttccggcccgcgctcgggcgagcgttccggtaaccgtgagcgccgtccgcgccag
gacgcgccggcgacgggctcgaccgaagtcccggtgaagaccgtggtcgtggccgagacg
gtggccgacctgccggccgcagccgaggcaatggctgccgattcggcgccgaagaagcgt
cgccgccgtggtggtcgcggtcgcggccgtcgcgagggtggtgccgagggcgcgccgcag
gtgcgcatccaggacaacaacaccgccgcgaccccgcgcgctgctggcgccgagggtgcg
caggccaacggcaaccgccgtccgtcgcgccatgtggccgcgtcgcgtccggccgctacg
ccggccccggcggcagcaccggctaagaaggaaggtttcttccgtcgtctgggccggatt
ttcggcggtaagtaa
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