Lactobacillus acidophilus FSI4: SD55_0225
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Entry
SD55_0225 CDS
T03681
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
laf
Lactobacillus acidophilus FSI4
Pathway
laf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
laf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SD55_0225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laf03021
]
SD55_0225
03400 DNA repair and recombination proteins [BR:
laf03400
]
SD55_0225
Transcription machinery [BR:
laf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SD55_0225
DNA repair and recombination proteins [BR:
laf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SD55_0225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF3632
TPR_20
Motif
Other DBs
NCBI-ProteinID:
AJP45700
LinkDB
All DBs
Position
229089..229643
Genome browser
AA seq
184 aa
AA seq
DB search
MGLDKFKDKNRDELSMIEVARAILEDNGKRMAFADIVNAVQKYLNKSDEEIRERLPQFYT
DMNTDGEFISMGENVWALRSWFPYESVDEEVNHPEDEEEDDSRKHHKKVNAFLASATGDD
DIIDYDNDDPEDDDLDAATDDSDDDYSDDDSDYDEDNDDADDVLPDGIEGQLSQLNDEDD
DEDD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgggattagacaaatttaaagacaaaaaccgcgatgaattgtcaatgatcgaagttgct
cgcgcaattttggaagacaatggcaagagaatggcatttgctgacattgttaatgccgta
caaaaatacttaaataagagtgacgaagaaattcgtgaacgtttgccacaattctatact
gatatgaacactgatggtgaatttatttctatgggtgaaaatgtttgggctcttcgctca
tggttcccatatgaatcagttgatgaagaagttaaccacccagaagatgaagaagaagac
gattcacgtaagcaccacaagaaggttaatgccttcttggcaagtgctaccggtgacgat
gatatcatcgactacgacaatgatgatccagaagacgatgacttagacgcagccactgat
gatagtgatgatgactacagtgatgacgattctgattatgatgaagataatgatgatgct
gatgacgtattgccagacggtatcgaaggtcaattgtcacaattaaacgatgaagatgac
gacgaagatgattaa
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