Roseibium aggregatum: B0E33_15320
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Entry
B0E33_15320 CDS
T04723
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
lagg
Roseibium aggregatum
Pathway
lagg01501
beta-Lactam resistance
lagg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
B0E33_15320
01503 Cationic antimicrobial peptide (CAMP) resistance
B0E33_15320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lagg02000
]
B0E33_15320
01504 Antimicrobial resistance genes [BR:
lagg01504
]
B0E33_15320
Transporters [BR:
lagg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
B0E33_15320
Antimicrobial resistance genes [BR:
lagg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
B0E33_15320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AQQ04770
LinkDB
All DBs
Position
complement(3275137..3278274)
Genome browser
AA seq
1045 aa
AA seq
DB search
MSAFFIDRPIFAWVIAIVTMLAGALAITTLSVSQYPQIAPTTVNISANYPGADAATVENS
ITKVIEQGMSGIDYLDYMTATSSNSGSAQISLTFSSKADPDVAQMQVQNKLQLVSSQLPQ
IVQNTGITVTKSTSGFLMVLGFVSTDGRLTSTDIADYVDNTLNDTLKRVEGVGETRLFGS
GYAMRIWLDPTKLLKYNLMPSDVSSAIQAQNTQVSAGQLGGLPQAEGQQLNATITASSRL
QTAQQFRDIILKSSEDGSVVRLNDVARVEVANESYSTSAFYNGMPASGLAVSLATGANAI
DTAQRVRDTIDRLSSTLPAGVDVVYPYDTTPFVKLSIEKVVHTLLEAVVLVFLVMYLFLQ
NLRATIIPTLAVPVVLLGTFGVLALFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLPPREATRKSMNEITGALIGIAVVLSAVFVPMAFFGGSVGIIYRQFSITIVSAMVL
SVFVALILTPALCATMLKQGDHGHKRGPFAWFNRGFDASANGYRAANGGILKRGKRFLVL
FIAIGVAMGWMFNRLPSSFLPQEDQGILIAMVNLPVGATQGRTLTVLDKVRTHFMENEPD
AVDSVFTVAGFGFGGQGQNVGLAFIRMKDFTEREDPRLAAQAVAGRAMGAFSQFKDARVF
ALAPPAIQGMGNTNGFSFYLQDINGAGHDRLMEVRNQLLGMAAQSGKLAATRPNGQEDQP
QFKVDIDTQKARLLDLGIPDINDTLSIAWGSDYVNDFMDRGRIKPVYVQADAPFRMQPSD
LDLWHVRNSNGDMVPFSAFASSRWTYGSPRLERFNGASAVELQGQAAPGISSGDAMAEID
ALVAQLPAGFVHEWTGLSYQERLSGDQAASLYAISILIVFLCLAALYESWSIPFAVMLSV
PIGVFGALAAALIFGQTNDVYFKVGLLTTIGLAAKNAILIVEFAIEQQRQGKDLLQATLD
AARQRLRPILMTSFAFILGVTPLAIATGAGSGAQNSIGIGVMGGMIASTVLGIFFVPLLF
VTVRRIFSRKQTNEAAPDTSGSKAH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttcttcatcgacaggccgatctttgcctgggtcattgccattgtcacgatg
ctggcaggcgcactggccatcacgacgctttccgtttcgcaatatccgcaaattgcaccg
accaccgtcaacatcagcgccaattatccgggcgccgatgcggcaacggtcgagaactcg
attaccaaggtgatcgaacagggcatgtccgggatcgattacctggactacatgaccgcg
acgtcttcgaactccggttcagcccagatctcgctgacgttctcctccaaggcggatccg
gacgttgcccagatgcaggtgcagaacaagctgcagctcgtttccagccagctgccgcag
atcgtccagaacaccggcatcaccgtcaccaagtcgacttccggcttcctgatggtgctc
ggcttcgtttcgacggacggacgcctgacctccaccgacattgccgactatgtcgacaac
acgctcaacgacacgctgaaacgcgtcgagggcgtcggtgaaacccggctgttcggctcc
ggctatgccatgcgcatctggctcgacccgacgaaactactgaaatacaacctgatgccg
agcgatgtcagttccgcaatccaggcccagaacacccaggtttccgccggccagcttggc
ggtctgccgcaggccgagggtcagcagctcaacgcgaccatcaccgcctccagccgcctg
cagactgcacagcagttccgcgacatcattctgaagagctccgaagacggctctgtcgtt
cgcctcaacgatgtcgcccgggtggaagttgccaacgaaagctacagcacctctgccttc
tacaacggcatgccggcgtccggccttgcggtctcgcttgcgaccggtgcaaacgccatc
gacaccgcccaacgggtacgcgacaccatcgaccggctctcctcgacgctgcctgccggg
gtcgatgtggtctatccctatgacaccacccccttcgtgaagctctccatcgagaaggtg
gtccacacactgctggaagcagtcgtgctggtgttcctggtgatgtatctcttcctgcag
aacctgcgcgcgaccatcattccgacacttgccgtgccagtggttctgctgggcaccttc
ggggtgcttgcgctgttcggctattcgatcaacacgctaacgatgttcgccatggtgctc
gccatcgggctattggtggatgacgccatcgtcgtggtggaaaacgtcgaacgcgtgatg
gcggaggaaggtttgccaccacgcgaggcaacccgcaaatccatgaacgagatcaccggc
gccttgatcggcattgcggtggtgctgtccgccgtcttcgtgccgatggcgtttttcggc
ggctccgtcgggatcatttaccgccagttctcgatcaccatcgtttcggccatggtgctg
tcggtattcgttgcgctcatcctgacgcctgcgctgtgcgccaccatgctgaagcagggt
gaccacggccacaagcgtggtcccttcgcctggttcaacaggggtttcgacgcaagtgca
aacggctacagggcggcaaatggcggcatcctgaaacgcggcaagcgcttccttgtgctg
ttcatcgcaatcggcgttgccatgggctggatgttcaatcgcctgccaagctccttcctg
ccgcaggaagaccagggcattctgattgccatggtcaacctgcccgttggcgcgacccag
ggccggacactgaccgtgctcgacaaggtacgcacccacttcatggagaacgagccggat
gcggtcgacagcgtcttcaccgtcgccggcttcggtttcggcggccagggacagaatgtc
ggcctcgccttcatccgcatgaaggacttcaccgagcgcgaagacccgcgacttgccgct
caggcagttgcaggccgtgccatgggagccttctcgcagttcaaggacgctcgtgtgttc
gcccttgccccgcctgccattcagggtatgggcaacaccaacggcttttcgttctatctg
caggacatcaatggcgctggtcatgaccggctgatggaggttcgcaaccagttgctgggc
atggcggcacaatccggcaaactggcggcgacacggcccaacggccaggaagaccagccg
cagttcaaggtcgacatcgacacgcagaaagcgcgcctgctcgacctcggcatcccggac
atcaacgacaccctgtcgattgcctgggggtccgactacgtcaacgacttcatggaccgt
ggccgcatcaagccggtctatgtgcaggccgatgccccgttccgcatgcagccatccgat
ctggatctgtggcacgtgcgcaattccaatggcgacatggtgcccttcagcgctttcgcc
tcatcgcgctggacctatggttccccgcggctcgagcgcttcaacggcgcgtcggctgtg
gaactgcagggccaggcggctcccggcatcagctcgggtgacgcgatggcggaaatcgat
gcgctcgtggcccagcttccggcaggcttcgttcatgaatggaccggcctttcctatcag
gaacggctttcgggcgatcaggccgcatcgctttatgcgatctcgatcctgatcgtgttc
ctgtgccttgccgccctttatgaaagctggtcgatccctttcgcggtgatgctgtcggtc
ccgatcggcgtcttcggcgccctggcggcggccctgattttcgggcaaaccaacgacgtc
tacttcaaggtcggcctgctgacgaccatcggcttggcggcgaaaaatgccatcctgatc
gtggagttcgccatcgaacaacaacgccagggcaaggacctgctgcaggcgacactggac
gccgctcgccagcggcttcggccgatcctgatgacgtccttcgccttcatcctgggtgtg
acgccactggcgattgccaccggggcaggttcgggtgcgcagaactccatcggcatcggc
gtcatgggcggcatgatcgcctccaccgtgctcggcatcttcttcgtgccgcttctgttc
gtcaccgtgcggcgcatcttcagtcgcaagcagaccaacgaagcagcccccgacacttca
ggcagcaaagcccattga
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