Roseibium aggregatum: B0E33_26100
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Entry
B0E33_26100 CDS
T04723
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
lagg
Roseibium aggregatum
Pathway
lagg01501
beta-Lactam resistance
lagg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
B0E33_26100
01503 Cationic antimicrobial peptide (CAMP) resistance
B0E33_26100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lagg02000
]
B0E33_26100
01504 Antimicrobial resistance genes [BR:
lagg01504
]
B0E33_26100
Transporters [BR:
lagg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
B0E33_26100
Antimicrobial resistance genes [BR:
lagg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
B0E33_26100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AQQ06626
LinkDB
All DBs
Position
5604220..5607375
Genome browser
AA seq
1051 aa
AA seq
DB search
MFSRFFIYRPKFALVISIVITIAGVLGYLSLPVEQFPNITPPVVNVTATYTGANAEVLEE
TVAAPIEGQVNGVDDMIYMQSTSNDSGNYSLNVTFAVGTDPDIATVNTQNRVSQANSQLP
SDVTNNGVTVQKASTNMLLVITLFSPNGSYDPVFLSNYASINLKDALARVPGVGLADVMT
DFSYGMRIWLDPDRLTSLGMTPTDFITAVRDQNIQVAAGQIGAPPVPDGQQFQYTIKAKG
RLASPEEFEQIVLRTGADGAVVTIGDVARVELGAQVYNASGEYNGKPSTVLAIYQAPGAN
ALQVSENVLARLDELAKNFPPDMQYGVPFNTTDFVQASLNDVITTLFLTFLLVVSVVFIF
LGNWRATIIPTVAIPVSLIGTFAVLLALGMTLNTISLFALVLAIGIVVDDAIVVVENVER
IIADEGLSPKEATTKAMEQITSPVIATTLVLLAVFVPTIFMPGITGRLYSQFAVTISVSV
LISSINALTLSPALCGLILKARSGPPRGIMGLFDRGITSVRNGYTGIIRRLVRFAVIGLA
VVAGAVALIVTLGGSLPQGFLPSEDQGYLMVDVQLPDGASLQRTENVTKQVVDLTSKTPG
VEDVVIVNGYSILNGATSSNAALVIATMKNWEDRQAPDLRIDAILAKFWAEFSTIPGANI
IAFNPPPIPGLGTTGGVQVMLQQTGGGSPQDLSSALGSMIYSANQSAEVGRAYSTFRANV
PQVFIDLDREKAKTLGINVSDVFTTLQAYLGSYYINDFNIFGRVYKVMIQAEGKFRDRVE
DIGALYVRSSDGTMVPMRSILTTQNVLGPQILTRYNMFRAAAVMADPAPGASTGVVINEV
NAAGAEALPDGYSLEWTGTALQQLGSGQIVLFILLLSILFTYLFLVAQYESWTMPIAILM
SVSFAILGALVAVFATGGDVNLYTQIGMIMLVGMGAKNAILIVEFAMEQRADGKSIKDAA
VEAAHLRFRAVMMTALSFLLGVVPLMTASSAGAASQKAIGFAVFGGMLFATCIGILMIPI
LYVNMQTMRETVKSWFGGKGKTQTEQEPVAS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgttttcacgcttttttatctaccggccgaaattcgcgctggtcatttccattgttatc
actattgccggtgtgcttgggtatctgtcgcttccggttgaacagtttccgaatatcacc
ccgccggtcgtaaacgttacggcgacctataccggcgccaatgccgaagtgctggaagaa
actgttgccgccccaatcgaagggcaggtcaacggcgtcgatgacatgatctacatgcag
tcgaccagtaacgacagcggcaactattcgctcaacgttaccttcgctgtcggaacagac
ccggacattgccacggtcaacacgcagaaccgggtcagtcaggccaacagccagctgcca
agcgatgtgaccaataacggtgtgacagtgcaaaaagccagcacgaacatgttgctggtc
attacactgttttcgccgaacggcagttacgatccggtcttcctgtcaaactatgcctcg
atcaacctgaaggatgcacttgcccgtgtgcctggggttggtctggcagacgtcatgacc
gacttttcctacggcatgcgtatctggcttgatccggacaggttgaccagcctgggcatg
acaccgacggatttcatcaccgccgtacgtgaccagaacattcaggtggctgccggtcag
atcggcgcacctccggttccggatggacagcagttccagtacacgatcaaggcaaagggc
cgtctggcctcaccggaagaatttgagcagatcgttctgcgaactggtgcagacggcgca
gtcgtaacgattggcgatgttgcccgcgtcgaactcggcgcgcaggtttacaacgcctcc
ggcgaatacaatggcaagccttccacggttctggcaatctatcaggcaccaggtgcaaac
gcgcttcaggtatcggaaaacgtgctggctcgcctggatgaactggccaagaattttccg
ccggacatgcagtacggcgttcccttcaacactacggatttcgttcaggcttctctcaac
gacgtcatcaccacgcttttcctgaccttccttctggtggtctcggtggtgttcatcttc
ctcgggaactggcgagcgacaatcattccaactgttgccattccagtgtcgcttatcggc
acgtttgccgtgctgctggcacttggcatgacgctcaacacgatttcgctgttcgcactg
gtgctggccattggtatcgttgtggatgatgccatcgtcgtcgtggaaaacgtggaacgc
atcattgccgatgaaggcttgtcgccgaaagaagccacgacgaaagcgatggaacagatc
accagtccggtgattgccacgacgctggtgctgctggcggttttcgttccgacaatcttc
atgccaggcattaccggccgtctctattcccagttcgctgtcaccatctcggtctctgtg
ttgatttcctcaatcaacgcgctgacgctgtctccggctctctgtggtctgatcctgaaa
gcccgttctggcccgccgcgcggcatcatggggctgttcgaccgtggcatcacatcggta
cgcaacggatataccggtattattcgccgccttgttcgcttcgccgtgatagggcttgcc
gttgttgccggggcggtcgccttgatcgtgacactcggcggatcactgcctcagggcttt
ctgccttcggaagaccagggctacctgatggtcgacgttcagcttcccgatggagcgtcg
ttgcaacggacggagaacgtgaccaagcaggtggttgacctgacctccaaaacgccgggt
gtggaagacgtcgtcattgtcaacggctactcaatcctcaacggcgcaacgtcctcgaat
gcggcgctggtgattgcgaccatgaagaactgggaagaccgtcaggctcccgaccttcgt
attgatgcgatccttgcaaagttctgggcggaattttcgactattcccggtgcgaatatc
attgccttcaaccccccgccgattccgggccttggcacgaccggcggtgttcaggtgatg
ctgcaacaaaccggtggaggttcgccgcaggatttgtcatcggcacttggctcgatgatt
tattctgccaaccagagtgccgaagttgggcgcgcctactcgactttccgggccaatgtg
cctcaggtctttatcgatcttgatcgtgaaaaggccaaaacgctcggcatcaatgtgtcg
gatgtgttcacgacactgcaggcttatctgggctcgtactatatcaacgacttcaacatc
ttcggccgggtctacaaggtgatgatccaggcggaaggcaagttccgcgatcgggtggag
gatatcggtgcactttatgtgcggtcgagcgacggcaccatggtgcccatgcgcagcatt
ctgacgacacagaatgtcctcggtccgcagattctgacccgctacaacatgttccgtgct
gctgccgtgatggctgatccggcacctggagcctcaacaggtgtggtcatcaacgaagtc
aatgccgcgggggctgaagcccttccggatgggtattctctcgagtggacaggtacagcg
ctgcagcagctcggatcggggcagatcgttcttttcatcctgcttttgtcaatcttgttc
acgtatctcttccttgtcgctcagtatgagagctggacgatgccgattgcgattttgatg
tcggtgtcctttgcaatcctcggggcgcttgttgcggtctttgcgactgggggggatgtc
aacctctacacacagatcggcatgatcatgcttgtcgggatgggcgccaagaatgccatc
ctcatcgtggagtttgcgatggagcagagggccgatggcaagtcgatcaaggatgcagca
gtagaagcggctcatcttcggttcagggcggtcatgatgacggccttgtcgttcttgctg
ggtgtcgtgccattgatgaccgcatcaagtgctggtgcggccagtcagaaggccattggc
ttcgcggtgttcggtggcatgctgtttgcgacctgcatcggcattctcatgatcccgatt
ctttatgtgaacatgcagaccatgcgtgaaaccgtcaaaagctggtttggcggaaaagga
aaaacccagacggaacaggagcctgttgcgtcctga
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