Lingula anatina: 106150542
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Entry
106150542 CDS
T04921
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lak04121
]
106150542
Enzymes [BR:
lak01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106150542
Ubiquitin system [BR:
lak04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106150542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
SGL
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
Z1
DUF3583
UPF0242
Motif
Other DBs
NCBI-GeneID:
106150542
NCBI-ProteinID:
XP_013378867
UniProt:
A0A1S3GYW8
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MATAATECDVKDEDSSLRTVITENFVSCPICLVEYTAPTDLPCKHTFCKGCLSTLISDLK
PGSKFPCPVCQREIEVPENGLEGFTHNFFVESLQDTVLKPTKKAKCSFCAFSSETETIAT
SKCITCHDYLCEKCSKLHCSTRFTKDHKVLTFQQIQSEEHQKEIQEQQVIFCSEHNDETL
RYYCMKCQKPVCRDCKILSHDDHKVTTLSTASKGVSCQLQARLDGLGSEDETMQEAIEKV
DQMIQGFQENKEYIQFEISQRADHLCQMVRQKEKTLLNDLDQTFSAQMKNLNISHDHFSS
LSSTIKSAVNVVGNTLKRGVPVEILMLEHQLRNRLDELQHTTATTEIPKELKLTLKTNQD
VDQDILSGAGLGEIHEEWRDSRLYEQDTSESTREGDEQASNSNSTSPAPPPQEKPKLKVK
ADCILEFDTGSTRPDGISLSPSGDYVTVHDEAGKLNVFSSDGTFKDIITSVSGTKLQYPE
GICHFPDGRMIVSDSDNNTMFMLSTQWEVLQTVCVQDPRGVALNDTCTEVAVVREGVERA
VSLYNMDRERLSLTPGHEINSYNGTPIFDEPYKVAYMKNGCIIACDIKSKKVHILTPAGE
PLYQYTGPDNKLGRPHGVCVDAYDNIMVTDFDNHCIHLVSRDGKFIQYIATEADGLDKPW
ACTINQDGDLVVTEDDGKARLDKLGTEDETIEEAIEKVDRIIQCFQENKEYVQLEISQRA
DHLCQLVRQKEQILLHDLDQTFSAQMKNLNISHDYFSSLSSTIKSAVNVVGNTLKRGVPV
EILMLEHQLRNRLEELQHTRAETEIPKELKLALNTNQDVDQDILRGAGIGQIHEEWRESR
LYEQDTSESTCESDDQASNSASPVPQSEGECVLEFDTGCTRPVGISVSPSGDYVTVHDKA
GKLNVFSSNGTLKTSITSVSGTKLQFPVGICHFPDGRVIVSDNGNNKLFMLSSQWEVLQT
TCVQEPWGVALNDNYSEVAVAHMGTEGAIRLYDIDRERIALTADHEINSYNGTPIFDEPY
KVAYMKNGCIIACDDKERKVHILTPAGEPLYQYAWPDYNLGPPYGVCVDAYDNILVTDNA
NHCIHCVSPDGKFIQYIATEADGLCDPWACTINQDGDLVVTEENGKVKVFCYLEK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgctgctacagaatgtgatgtaaaagatgaagattcaagcctgagaactgtg
ataactgaaaactttgtgagttgtcctatatgccttgtggagtacactgccccgacagat
ttgccatgtaaacatacattttgtaaagggtgtctgtcgactttaatttctgatttaaaa
ccaggaagtaagtttccatgcccggtttgtcagcgagaaatagaagtgcctgagaatgga
ctggagggctttactcataatttcttcgttgaaagcttgcaggacactgttcttaaacca
accaaaaaggcaaagtgcagcttttgtgccttttcgtctgaaactgaaactattgccaca
tctaaatgcatcacctgccatgactacctgtgtgaaaagtgctctaagttacactgcagt
accaggttcaccaaagaccacaaggtcctcacttttcaacagatacaaagtgaggagcac
caaaaagagatccaagaacagcaagttatattctgttcggaacacaatgacgaaactcta
cgttactactgtatgaaatgccagaaacccgtctgtcgtgattgtaagatcttaagtcac
gatgatcacaaggtgacaactttgtcaacagcttctaaaggtgttagttgtcaactacag
gcaagattagatggactggggtcagaagacgaaactatgcaagaggcaattgagaaagtg
gaccaaatgatacaaggctttcaggaaaacaaagaatacattcagtttgaaatttcacaa
agagcagatcatctttgtcaaatggtgcgccaaaaagaaaaaacccttcttaatgactta
gatcaaacgttttctgctcagatgaaaaacttgaatatatcccacgatcatttcagcagc
ttatcttccaccattaagagtgctgtaaatgtagtgggaaacacgttgaaacgaggtgtc
ccggtagagatcctcatgttagagcaccagttaagaaatagactagatgagttacagcac
acaacagccacaaccgaaatacccaaagaattaaaactcacattaaaaaccaaccaagat
gttgaccaagatatattgagtggggctggccttggagaaattcatgaagaatggagagac
agtcgcctctatgaacaagacacctccgagtccactcgtgaaggtgatgaacaggcttca
aattcaaactcaacatcaccggcgccgcctccacaagaaaaaccgaagttaaaggtcaaa
gctgactgcatactggagtttgacactggatctacaagaccagatggcatctcattaagt
ccatctggagactatgtcaccgtccacgatgaggcaggcaaactaaatgtgtttagttca
gatggcacatttaaagatatcattaccagtgtttcaggtaccaagctgcagtatccagaa
ggaatatgtcacttccctgatggcagaatgattgtgtctgatagtgacaataacacaatg
tttatgttgtcaacacaatgggaagtgctacaaacggtgtgtgttcaggatccaaggggc
gtggctctgaacgacacctgcactgaggttgctgtagtacgtgagggggtggaaagggcg
gtaagtttgtacaacatggaccgggaaagactatcactgactcctggtcatgaaataaat
tcttacaatgggacaccaatattcgatgaaccgtataaggtggcatatatgaaaaacggt
tgtattattgcttgtgatattaaatcaaagaaagttcatatcctgaccccagctggtgaa
ccactgtatcagtacacaggacctgataacaaattaggtcgcccccatggggtctgtgtt
gatgcatatgacaacataatggttacagactttgataaccactgtatacaccttgtttcc
cgagatgggaagttcatccagtacatagcaactgaagctgatggactagataaaccatgg
gcatgtaccatcaaccaggatggagatctagtcgtaacagaagacgacggaaaagcaaga
ttagataaactggggacagaagacgaaactatagaagaggcaattgagaaagtggaccga
ataatacaatgttttcaggaaaacaaagaatacgttcagttagagatttcacaaagagca
gatcatctatgtcaattagtgcgccaaaaagaacaaatccttcttcatgacttagatcag
acgttttctgctcagatgaaaaacttaaatatatcccacgattatttcagcagcttatct
tccaccattaagagtgctgtaaatgtagtgggaaacacgttgaaacgaggtgtcccggta
gagatcctcatgttagagcatcagttaagaaatagactagaggagctacagcacacaaga
gccgaaaccgaaatacccaaagaattaaaactcgcattaaataccaaccaagatgttgac
caagatatattgagaggggctggcattggacaaattcacgaagaatggagagagagtcgc
ctgtatgagcaagacacctccgagtccacttgtgaaagtgatgaccaggcttcaaactca
gcatcaccggtgcctcagtctgagggtgagtgcgttctagagtttgatactggatgtaca
agaccagtgggcatctcagtaagtccatctggagactatgttacggtccacgacaaggca
gggaagctgaatgtttttagttcaaatggcacgcttaagacatccattaccagtgtttca
ggtaccaaactgcagttccccgtaggaatatgtcacttccctgatggcagagtgattgtg
tctgataatggcaataacaagctttttatgttgtcatcacaatgggaagtgctccaaacg
acttgtgtccaggaaccatggggtgtggctcttaacgacaattattcggaggttgctgtt
gcacatatggggacggaaggggcgatacgtttgtacgacattgacagagaaagaatagca
ttgactgctgatcatgaaataaattcttacaatgggacaccaatattcgatgaaccatat
aaggtggcatatatgaaaaacggttgtattattgcctgtgatgataaagaaaggaaggtc
catattctgaccccagctggtgagccactgtatcagtacgcatggcctgattacaaccta
ggtccaccgtatggggtctgtgttgatgcatatgacaacatactggttacagataatgct
aaccactgcatacactgtgtatccccagatggaaagttcatccagtacatagcaaccgaa
gctgatggactatgtgacccatgggcatgtaccatcaaccaggatggagatcttgtggta
acagaagaaaacgggaaagtgaaagttttttgttatttggaaaagtag
DBGET
integrated database retrieval system
