Lingula anatina: 106151340
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Entry
106151340 CDS
T04921
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lak03016
]
106151340
Enzymes [BR:
lak01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
106151340
Transfer RNA biogenesis [BR:
lak03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106151340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_NdrI
DUF6342
Motif
Other DBs
NCBI-GeneID:
106151340
NCBI-ProteinID:
XP_013380014
UniProt:
A0A1S3H4E9
LinkDB
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Position
Unknown
AA seq
697 aa
AA seq
DB search
MDEGTFLADLAAVIAQSWLLILLGFLGLAWLTFQQRKTYVPGKPKRRLSVQASKNSDERN
LNKTKSSKKETCVKIFFGTQTGTAKTFADIIKKEASEHSTKCEVIDLKTYDPEDNITDET
DGKNICVFIISTYTEGSPPDDAAWFYKWLEEAASDFRIQKTMLQDMRYCVVGLGNSLYKE
RYNKVARNIDHWFHKLSANRVLGIGLLDENVASSKNGGIEADFEFWKNRFWSMVLGSPQN
KKDVKPNCGTADGDTKEMYETSSEEDTEDEEEEGDGDGEKVQKANGVVDVEDIGKMVNNI
KKAKAKRKVEDDNKSKEPREMITPLLKTSLQKQGYRLIGSHSGVKLCRWTKSMLRGRGGC
YKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDDPELILEGALQNHC
NMIKQFKGVPGVKSDRFTEGLTPKHCALSLVGEPIMYPEINKFAEMLHSKGISSFLVTNA
QFPDAIRNLTPVTQLYVSVDASTKESLKKIDRPLFRDYWERFLDSLKALSEKGQRTVYRL
TLVKNYNTEDIENYASLVSIGKPDFIEIKGVTYCGESKASRLTMDNVPWHEEVIKFVQDV
VDRLPDYAIASEHEHSNCVLVANKKFQVNGDWWTWIDYDRFHELVQMYKASEGQKTFSAA
DYMAQTPHWAVFGADERGFDPGETRFMRKKTKDISGC
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggtacttttcttgctgatcttgcagcagtcatagctcaaagttggctgttg
atactacttggttttctggggctcgcatggttgacttttcaacaaagaaaaacatatgtt
cctggtaaaccaaagagaagactgtctgttcaggcttcaaaaaattctgatgaaagaaat
ctgaataaaaccaagtcaagtaaaaaggaaacttgtgtgaaaattttctttggaacccaa
acaggaacagcaaagacatttgcagatattatcaaaaaagaagcttctgagcacagcaca
aaatgtgaagtcattgatttgaaaacttatgatcctgaagataatattacagatgagact
gatgggaagaacatttgtgtgttcatcatatctacctatacagaaggctcccctccagat
gacgctgcatggttttataagtggctggaagaagctgcgtctgacttcagaatccagaag
accatgcttcaagacatgaggtattgtgtggtgggattgggcaattctttgtacaaggag
agatataacaaggttgctagaaatatagaccactggttccataagttgtcagctaatagg
gtgctgggtattggtcttctagacgagaatgttgcctctagcaaaaatggaggtattgaa
gctgattttgaattctggaaaaacaggttttggtctatggtcttaggatcgccccaaaac
aagaaagatgttaaacctaactgtggcacagcagatggtgacaccaaagaaatgtatgag
acaagtagtgaagaagacacagaagatgaggaggaggagggagatggagacggagaaaaa
gtacagaaagccaatggtgtggtggatgtggaggacatagggaagatggtcaataatatt
aagaaggcaaaggctaaaaggaaggttgaagatgacaacaagtcaaaagaacccagagag
atgataacaccactgctgaagacttcacttcagaaacaaggctacagactcatcggttca
cattctggagtcaagctctgcagatggactaagtccatgctccgtggacgaggtggttgt
tataaacacaccttctatggcattgaaagtcacaggtgtatggaaactactcccagtctt
gcttgtgccaacaagtgtgtgttctgttggagacatcacaccaaccctgtaggcacagag
tggcgttggaagatggatgatccagaacttattcttgaaggagcactacaaaaccattgt
aatatgattaaacagtttaaaggtgttccaggagtgaagtcagacaggtttactgagggg
ctgactccaaagcactgtgccttgtcacttgttggggaaccaatcatgtacccagagatc
aataagtttgctgaaatgcttcatagcaaagggatctcaagcttcttggttacaaatgct
caatttccagatgctattagaaatctgacccctgtcactcagctatatgtcagtgtagat
gccagcacaaaagaaagcctgaagaagatagacagaccactgttccgagactactgggaa
agatttttggacagcttgaaggcactctcagaaaaaggtcagaggacagtgtacagacta
acactggtgaagaactacaatacagaggacatagaaaattatgcaagtctggtatctatt
ggaaagcctgacttcatagaaattaagggggtaacctactgtggagaatccaaggccagt
cgtctgaccatggacaatgttccgtggcatgaggaggtcatcaaatttgtccaggacgtg
gtggacagactgcctgattatgccatagcgtctgaacatgaacactctaattgtgtccta
gttgctaataaaaagtttcaggtcaatggagactggtggacgtggatagactatgacagg
ttccatgagttagtgcaaatgtacaaagccagtgaaggccagaaaactttctcagcagca
gactatatggcacaaaccccacactgggcagtgtttggggcggacgaacggggatttgac
cctggagagaccaggttcatgaggaagaaaactaaagacatcagcggctgctag
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