Lingula anatina: 106157241
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Entry
106157241 CDS
T04921
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lak
Lingula anatina
Pathway
lak03022
Basal transcription factors
lak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106157241
09124 Replication and repair
03420 Nucleotide excision repair
106157241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106157241
03400 DNA repair and recombination proteins [BR:
lak03400
]
106157241
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106157241
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106157241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
106157241
NCBI-ProteinID:
XP_023933479
UniProt:
A0A2R2MTA7
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MADDEVDQGYTWENEYERTWEALQEDDEGSLRTAVDGIIHKGKRKRLLEKKANIRLGMMR
HLFLVLDMSESMEDQDLRPSRLLSSLKLLESFIEEYFDQNPISQLGVIDTRNKRAEKVTE
LGGNPRKHIQLIQKLAVKPCQGEPSLQNSLELAMQTLRHMPGHASREILIIYGSLTTCDP
GDIYETVKSLKELNIRCSIIGLAAEVQICKKICQETKGSYHVILDETHFRDLLTYHVTPP
PARNNAESSLIRMGFPHHQLSGNKEEKPAMCMCHLDSQTFQGFRSGGYFCPQCKSKYCEL
PVECKACGLTLVSAPHLARSYHHLFPLESYKEVQDKSSVLQSHCFSCQTEFTEHPVYVCG
RCQKGFCIDCDVFIHEALHSCPGCSGSRHTQERQISGTLLAGLTGK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgaagtcgatcaaggatacacgtgggaaaacgaatatgagagaacttgg
gaagctctgcaagaggatgatgaaggttccctccgcacagctgtggatggcatcattcac
aaaggaaagagaaaacggctgctggagaagaaggcaaacatcaggttggggatgatgcgg
catctatttctagtacttgacatgtcggagtctatggaagatcaggatctcaggcctagc
agactattgtcttctctaaagttgctggaaagcttcatagaggagtattttgaccagaac
cccatcagtcagctgggggtgatagacaccagaaacaagagagcagaaaaagtgacagag
ctcggaggcaatcccagaaaacatatccagctaatacagaaactagcagtgaagccatgc
cagggagagccatctctgcagaacagtttagaacttgccatgcaaacattacgacacatg
cctggtcatgccagtagagaaattctcatcatctatggaagcttgacaacttgtgatcct
ggggacatctatgaaactgttaagtctttgaaggagttaaacatcaggtgctccatcatt
ggcctggctgcagaagtacagatatgcaaaaaaatatgtcaagaaactaaaggtagctat
catgttatactggatgaaacccactttagagaccttctgacctatcatgtgacaccacct
ccggccaggaataatgcagaatcttctctaataagaatgggatttcctcatcaccaactc
tctggaaacaaagaggaaaaaccagcaatgtgcatgtgtcacctggacagccagacattt
caagggtttcgcagtggaggatatttctgtccacagtgcaagagtaaatactgtgagctg
ccagtagaatgtaaagcctgtgggttaacactagtttcggctccacatctggccaggtca
taccaccatttgtttccactagaatcgtacaaggaagtgcaggataaatcttcagttttg
cagagtcactgtttttcctgccagacagaattcacagaacatcccgtatatgtctgtggg
cggtgccagaaagggttctgcattgactgcgatgtctttatccatgaagctctccattct
tgcccaggctgctctgggtcccgtcacacacaggaacgccaaatctcagggacacttctg
gccgggttaacagggaaatga
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