Lingula anatina: 106165996
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Entry
106165996 CDS
T04921
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lak
Lingula anatina
Pathway
lak03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106165996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lak03400
]
106165996
Enzymes [BR:
lak01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
106165996
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
106165996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
BRCT
DNA_ligase_IV
RNA_ligase
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
106165996
NCBI-ProteinID:
XP_013399844
UniProt:
A0A1S3IQM4
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MTTVASKVPFSELAGLLEKISKKQGADKKLLLQEFINRWRDFHGKLHADDANTTDSFYSA
LRLLLPHLERERAAYGIKENTLAKLYIEVLCLGKDSPAADKLIKYRAPKNAKGDAGDFAT
VAYFVLKPRCPEKGSLTIEEVNQCLDGIATNQTTGKKDLVRKNILHLLRNLSALEQKWLI
RMIMKELKCGLSQQAILNVFHPDANEYFNVTTSLEKVCANLKDPSTRMHEIEISVGAPFH
PMLGELAVPKQLDKIMEGKMFYIEIKFDGERMQLHKKEDEYMYFSRNGHNYSRTFGENPY
DGNLTPYIANCFKPGVKNCILDGEMVGIHPETKIIRTKGENFDIKSDTNLDGYQPCLCVF
DILLLNDRVLSNLPLRERKEILKDVFNPVECRMFIAESKEATTSKECLQALNDAIDKREE
GIMVKNPDSVYKPSVRKGGWYKIKPEYMRGLGDDLDVLVVGGYFGVGARGGLVSHFLCAV
AEPFEPGEKPSKFRSFCRVGSGYSRKELFEFNRRMQDKWIPYSDRKGPPSWLILGREKPS
LLVEPSDSTILQIKASEITSDSDKFGTGCTLRFPRVEKIRSDKPWHECLTFTELKELQEQ
FAGKLAGRHADEDHEDEPIKKKKKVVVRQEKPLVAPQFRATDTSQVKKVSELFEDKEFCV
VNGSSKHSKASLEKKIVEYGGTAVQHPGPETFCVLCDKVQMKVKNIISTNKHDVVKLDWL
VRCTEARRLLPWVPSDMLHARPETEALFKQNYDDYGDSYTEDTTIDQLMVVFKKVQEEGK
LKPVSTDFIAEIENKYFVEGSTYGLFRLCRVYLDDNTVIGDKSTHIKDCSLELTSLELRM
YGATLCEMLNEDVTHVVLCDRDLGRIDKFRSLNRSRWQKFHIVTQDWVSDCIDNGKILGE
RGYEPA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgactacggttgcttccaaagttccattttccgaacttgcaggactactcgagaaaata
agcaaaaagcaaggagcggacaaaaaacttctgctgcaagaattcattaaccgctggcgt
gatttccatggaaagttgcatgcagacgatgctaatacgacagacagtttctattcagca
ttaagacttctgctaccccatttggagcgagaaagagctgcatatggcattaaggagaac
acacttgccaagctgtatatagaagtgctgtgcctgggaaaggacagccctgctgcagac
aagttgattaaatacagagctcccaagaatgctaaaggggatgctggtgattttgcaact
gtggcctactttgtgctgaagccccgctgcccagagaagggaagtttgaccatcgaggaa
gtgaaccagtgcctagatggtattgccacaaatcagaccacaggaaagaaagatttagtg
agaaaaaatattctgcatctgttgaggaacctgtcagctcttgagcagaaatggttgata
aggatgatcatgaaggagttgaagtgtggtttaagtcaacaggccattttaaatgtcttt
caccctgatgccaatgaatatttcaatgtgaccacaagtttagaaaaggtgtgtgcaaat
cttaaagatcctagcactcgtatgcatgagatagagatatcagtgggtgcccccttccat
ccaatgttgggagagctagcagtgcccaaacagcttgataaaattatggaaggaaagatg
ttctacatagaaatcaagtttgatggagagcgtatgcagctacacaagaaagaggatgaa
tatatgtatttctcaagaaatggtcacaattactccagaacctttggtgaaaatccttat
gatggaaatttaaccccatatattgctaactgcttcaagccaggagtgaaaaattgcatt
cttgatggagaaatggtaggaatacacccagaaacaaaaataattagaaccaaaggagaa
aattttgacataaaatctgacactaacctagatggttaccagccttgtctttgtgtgttt
gatatcctgttgctgaatgatagagttctgtccaaccttccactcagagaaaggaaggaa
atactgaaggatgtctttaatccagttgaatgcagaatgtttattgctgaaagcaaagag
gcaaccacaagcaaggagtgtcttcaagcattgaatgatgccattgacaagagagaagag
gggatcatggtgaagaacccagactctgtgtacaaacccagtgtgcgcaaaggtggctgg
tacaagatcaagcctgagtacatgaggggtttgggagatgacctagatgtcctggtggtg
ggagggtactttggtgtgggggccagagggggactggtgtcacacttcctgtgtgctgtg
gctgagccctttgagcctggagagaagccctccaaattcaggtcattttgtcgggtggga
tccggatatagcaggaaagagctgtttgaattcaacaggcgtatgcaagataaatggatt
ccatattcagacaggaaagggccccccagttggctaatattgggcagggaaaagcccagt
ctcttggtagaaccctcagattccactatactgcaaatcaaagcctctgagatcacctca
gacagtgacaagtttggcactgggtgtaccttgagatttccacgtgtagaaaaaatacgc
tctgacaagccatggcatgaatgcttgacatttacagaattgaaggagctacaggagcaa
tttgctggtaagctagcaggtcgccatgcagatgaggaccatgaagatgaaccgataaag
aaaaagaagaaagttgttgtaagacaggagaaacctttagttgctccacagtttagagcg
actgatacttcacaggttaaaaaggtatctgaactttttgaagataaagaattctgtgtg
gtcaatgggtcaagtaaacattccaaagccagcctcgagaagaagattgttgagtatggg
ggaactgcggttcaacatccaggtccagagacgttttgtgtgctatgtgacaaagtgcaa
atgaaagtgaaaaatatcatcagcaccaacaaacatgacgtagtgaagttggactggttg
gtgagatgcacagaggctaggagacttctgccttgggttccatctgatatgctgcatgcc
agaccagaaacagaagccttgtttaaacagaattatgatgattatggagacagttacaca
gaagataccaccatagaccagctcatggttgttttcaagaaagtgcaagaagagggtaaa
ttgaaaccagtgagcacagattttatagctgagatagaaaataaatattttgtggaaggt
tctacatatggtctgttcaggctatgcagggtgtacctagatgacaacacagtgattggt
gacaaaagcacccacataaaggactgtagcttggagctgaccagcttagaactgaggatg
tatggagctactctgtgtgaaatgttgaacgaggatgtcacccacgtagttttatgtgac
agagacctgggaaggattgacaaattcaggagtcttaatcgctccagatggcagaaattc
catattgttacacaagattgggttagtgactgtatagataatgggaagattcttggagaa
agaggatatgaaccagcatag
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