Lingula anatina: 106171155
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Entry
106171155 CDS
T04921
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
lak
Lingula anatina
Pathway
lak03013
Nucleocytoplasmic transport
lak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106171155
09122 Translation
03013 Nucleocytoplasmic transport
106171155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106171155
03041 Spliceosome [BR:
lak03041
]
106171155
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106171155
Spliceosome [BR:
lak03041
]
Complex C
Other components
EJC/TREX
106171155
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106171155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
106171155
NCBI-ProteinID:
XP_013406771
UniProt:
A0A1S3J974
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MAASTASGSDFEKQRQTCLKFIEKHHNSTDLNGLRDEYQTLPGSESERKLALDQAFRDAV
HKQVQSGGDINILTSLINLAVEAVRQELGSHSTPFLLLQDTFDGLELEKCSSLFKFVEDG
VATWKSDIFYSAGKNYLLRMCNDLLRRLSKSLDTVFCGRIQLFLARLFPLEEKSGVNLTS
QFNLDNVTTFSSSAEDFVRKSSETDGEKDDSMEIEEGEMEDTLSSSIPIDYNLYRRFWSL
QDNFRNPQQCYEKIAWKQFVVNADEVLKVFTSNKLDDIKSSRKNLEQPKQSDTHEYFAKY
LTNEKLLDLQMSDGNFRRYVLVQFLILFQYLNSTVKFKSANQVLSEEQSNWVRESTDKVL
QLLRETPPDGEQFAKYFEHLLAREENWNAWKNEGCPSYVREATENTAKQKSLRVRKRSLG
EDIKATGGKVVKMGNDELTRLWNIYPSNMEACKSDKRIFLPSLEDFFEEAILQADPEQQI
EEQYKLVSQSNFCWRSLRLLARRSPHFFAQTNQQPGALKISKFVESMVMRIAKEMPSTLQ
EEPKTELEEEEDIREEHQEEELDKAEETGKEEAVEVVTADQVATVAEELSQEWKRLAVEL
NFPEDDIAYIESDNEDTVSQALKMLTLWMENEAERATPGTLKIALKEVGLIDIANKVFPS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccacagcaagcggctccgattttgagaagcaaagacaaacgtgtctaaaa
ttcattgagaaacatcacaacagcacagacttgaatggtttacgagatgagtaccaaact
ttgccgggcagtgaatcagaaagaaagctagcccttgaccaagccttcagagatgcagtt
cacaaacaagtgcagtcaggaggtgatatcaacatacttacatcactcataaatttagct
gtagaggcagtcagacaagaattaggttcccactccacaccattccttttgttgcaagac
acgtttgatggcttggagctagagaaatgcagctcactcttcaagtttgtggaagatggt
gtagccacatggaagtcggacatcttttattcagctggaaaaaactacctgctgcgaatg
tgcaatgatctgctgaggaggttgtctaagtcccttgatacagtgttctgtggtagaata
cagctgttcctggccaggctattcccactggaagagaaatcaggggtcaatctaacatcc
cagttcaatttagataatgtcacaacatttagctctagtgcagaagattttgtcaggaaa
tcttcggaaacagatggagaaaaagatgatagcatggagattgaagaaggagaaatggaa
gatactttatcaagctccattcccatagactacaatttgtacaggcggttctggtctctt
caggacaacttcagaaatccacagcagtgctatgagaagatagcttggaaacagtttgta
gtgaatgcagatgaagtacttaaagttttcacaagtaataaactcgatgacataaaatcc
agtaggaagaatttagaacaacccaagcagtcagacacacacgagtactttgccaagtat
ctgaccaatgaaaagctgctagacctccagatgagtgacggtaacttcagaagatatgtc
cttgtacagtttctcatcctattccagtatctgaattcaacagtcaaattcaaaagtgcc
aaccaagtgctatcagaagagcagtccaactgggtgagggagtccacagataaagtgctt
caacttctcagggagacgcctccagatggagaacagtttgctaaatattttgagcacctg
ttggccagagaagagaactggaatgcctggaagaatgagggatgccccagctatgtcagg
gaggccacagaaaacactgcaaaacagaaaagtttgagagtgcggaagaggagtttaggt
gaggacatcaaggccacaggagggaaggtagtgaagatgggcaatgatgagctgaccaga
ctgtggaacatttacccctccaatatggaagcttgcaaatctgataaaaggattttcctg
ccatctttggaagacttttttgaggaagcaatactccaggctgatccagaacaacagata
gaagagcagtacaaactcgtgagccaaagcaacttctgttggcgttctctgcgcctgctg
gctagaagaagtcctcacttctttgctcaaactaaccagcagccaggagctctcaaaatc
tcaaagtttgtggagtccatggtgatgaggattgccaaggaaatgcctagtactctgcaa
gaagagcctaagactgaactggaagaggaagaggacatcagagaggaacaccaagaagaa
gaactggacaaggctgaagagactggtaaagaggaggctgtggaggtggtcacggcagat
caggtggccactgtggctgaggagctgagtcaggagtggaagagactggccgtggagctc
aacttccctgaagatgacattgcttacatagagagcgacaatgaagacacagtttctcag
gccttgaaaatgcttacgttgtggatggaaaatgaagctgaacgtgccaccccagggact
ttgaagatcgctctcaaggaagtgggtctcatagacattgcaaacaaagtgtttccctcc
tag
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