KEGG   Lingula anatina: 106171155
Entry
106171155         CDS       T04921                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
lak  Lingula anatina
Pathway
lak03013  Nucleocytoplasmic transport
lak03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106171155
  09122 Translation
   03013 Nucleocytoplasmic transport
    106171155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lak03019]
    106171155
   03041 Spliceosome [BR:lak03041]
    106171155
Messenger RNA biogenesis [BR:lak03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106171155
Spliceosome [BR:lak03041]
 Complex C
  Other components
   EJC/TREX
    106171155
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106171155
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 106171155
NCBI-ProteinID: XP_013406771
UniProt: A0A1S3J974
LinkDB
Position
Unknown
AA seq 660 aa
MAASTASGSDFEKQRQTCLKFIEKHHNSTDLNGLRDEYQTLPGSESERKLALDQAFRDAV
HKQVQSGGDINILTSLINLAVEAVRQELGSHSTPFLLLQDTFDGLELEKCSSLFKFVEDG
VATWKSDIFYSAGKNYLLRMCNDLLRRLSKSLDTVFCGRIQLFLARLFPLEEKSGVNLTS
QFNLDNVTTFSSSAEDFVRKSSETDGEKDDSMEIEEGEMEDTLSSSIPIDYNLYRRFWSL
QDNFRNPQQCYEKIAWKQFVVNADEVLKVFTSNKLDDIKSSRKNLEQPKQSDTHEYFAKY
LTNEKLLDLQMSDGNFRRYVLVQFLILFQYLNSTVKFKSANQVLSEEQSNWVRESTDKVL
QLLRETPPDGEQFAKYFEHLLAREENWNAWKNEGCPSYVREATENTAKQKSLRVRKRSLG
EDIKATGGKVVKMGNDELTRLWNIYPSNMEACKSDKRIFLPSLEDFFEEAILQADPEQQI
EEQYKLVSQSNFCWRSLRLLARRSPHFFAQTNQQPGALKISKFVESMVMRIAKEMPSTLQ
EEPKTELEEEEDIREEHQEEELDKAEETGKEEAVEVVTADQVATVAEELSQEWKRLAVEL
NFPEDDIAYIESDNEDTVSQALKMLTLWMENEAERATPGTLKIALKEVGLIDIANKVFPS
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggcagcctccacagcaagcggctccgattttgagaagcaaagacaaacgtgtctaaaa
ttcattgagaaacatcacaacagcacagacttgaatggtttacgagatgagtaccaaact
ttgccgggcagtgaatcagaaagaaagctagcccttgaccaagccttcagagatgcagtt
cacaaacaagtgcagtcaggaggtgatatcaacatacttacatcactcataaatttagct
gtagaggcagtcagacaagaattaggttcccactccacaccattccttttgttgcaagac
acgtttgatggcttggagctagagaaatgcagctcactcttcaagtttgtggaagatggt
gtagccacatggaagtcggacatcttttattcagctggaaaaaactacctgctgcgaatg
tgcaatgatctgctgaggaggttgtctaagtcccttgatacagtgttctgtggtagaata
cagctgttcctggccaggctattcccactggaagagaaatcaggggtcaatctaacatcc
cagttcaatttagataatgtcacaacatttagctctagtgcagaagattttgtcaggaaa
tcttcggaaacagatggagaaaaagatgatagcatggagattgaagaaggagaaatggaa
gatactttatcaagctccattcccatagactacaatttgtacaggcggttctggtctctt
caggacaacttcagaaatccacagcagtgctatgagaagatagcttggaaacagtttgta
gtgaatgcagatgaagtacttaaagttttcacaagtaataaactcgatgacataaaatcc
agtaggaagaatttagaacaacccaagcagtcagacacacacgagtactttgccaagtat
ctgaccaatgaaaagctgctagacctccagatgagtgacggtaacttcagaagatatgtc
cttgtacagtttctcatcctattccagtatctgaattcaacagtcaaattcaaaagtgcc
aaccaagtgctatcagaagagcagtccaactgggtgagggagtccacagataaagtgctt
caacttctcagggagacgcctccagatggagaacagtttgctaaatattttgagcacctg
ttggccagagaagagaactggaatgcctggaagaatgagggatgccccagctatgtcagg
gaggccacagaaaacactgcaaaacagaaaagtttgagagtgcggaagaggagtttaggt
gaggacatcaaggccacaggagggaaggtagtgaagatgggcaatgatgagctgaccaga
ctgtggaacatttacccctccaatatggaagcttgcaaatctgataaaaggattttcctg
ccatctttggaagacttttttgaggaagcaatactccaggctgatccagaacaacagata
gaagagcagtacaaactcgtgagccaaagcaacttctgttggcgttctctgcgcctgctg
gctagaagaagtcctcacttctttgctcaaactaaccagcagccaggagctctcaaaatc
tcaaagtttgtggagtccatggtgatgaggattgccaaggaaatgcctagtactctgcaa
gaagagcctaagactgaactggaagaggaagaggacatcagagaggaacaccaagaagaa
gaactggacaaggctgaagagactggtaaagaggaggctgtggaggtggtcacggcagat
caggtggccactgtggctgaggagctgagtcaggagtggaagagactggccgtggagctc
aacttccctgaagatgacattgcttacatagagagcgacaatgaagacacagtttctcag
gccttgaaaatgcttacgttgtggatggaaaatgaagctgaacgtgccaccccagggact
ttgaagatcgctctcaaggaagtgggtctcatagacattgcaaacaaagtgtttccctcc
tag

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