Lacimicrobium alkaliphilum: AT746_09455
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Entry
AT746_09455 CDS
T04189
Symbol
yebU
Name
(GenBank) RNA methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
lal
Lacimicrobium alkaliphilum
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lal03009
]
AT746_09455 (yebU)
Enzymes [BR:
lal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
AT746_09455 (yebU)
Ribosome biogenesis [BR:
lal03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AT746_09455 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
YebU_pre-PUA_dom
Methyltranf_PUA
Methyltransf_31
FtsJ
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
ALS98462
UniProt:
A0A0U3ABS0
LinkDB
All DBs
Position
complement(2071474..2072946)
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AA seq
490 aa
AA seq
DB search
MSLPYLPDTFLNHMAEIMPDSLSMDGFIQACKAPLRKSIRVNTLKISVQDFCQRMKQQNW
RLTPVPWCSEGFWLERPQQQEHMAPLGSTPEHLAGLFYIQEASSMLPPQALIGNALPERV
LDMAAAPGSKTTQLSALMHNNGLLVANELAASRIKSLAAVLQRLGVRNTAISHFDGKVFG
DWLPQTFDAVLLDAPCGGEGTIRKDPDALKNWSQASIDSISALQEQLIDSAFRALKPGGC
LVYSTCTLNQQENQSVCQYLLDRYADSVEVEALDKLFPGAEKAVTEQGYLHIWPQLFNSE
GFFVARFRKTRDLGLQLPAPRKAQLPFSPASKKQQQQLNDYLTGQFGCRLPEESRLFIKE
QDYWLFPQQTENLLGQFRFQRVGLKIASRHKSGFRLSHDAAMALGMNFTRQCLALSTDQL
RQYYQGRDLTADTKPPQGELLLTWQNTPVGLAKGLGLKIKNTLPRELVRDNLPDWSADGQ
PHNLYPEPME
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaccctatcttccggataccttcttaaatcacatggctgagattatgcctgac
tctttgtccatggacggatttattcaggcctgcaaagccccgttgcgcaagagtatcagg
gtcaatacgctgaagatcagcgtgcaggatttttgtcagcgaatgaaacaacaaaactgg
cgccttacccctgttccatggtgctcagagggattctggctggagcgcccacaacagcag
gaacacatggcccccctggggagcacaccagagcatctggccgggcttttttatattcag
gaagccagttctatgctgccaccgcaggcgcttatcggtaacgcgttacctgaaagagtc
cttgatatggcggccgcaccaggctcaaaaaccacacaactaagcgccctgatgcataac
aatggtttgctggttgctaatgagctggcggcaagccggattaaatctctggcagcagtg
ctgcagcggctgggtgtacgtaatacggctatcagtcattttgatggtaaggtgtttggc
gactggttaccgcaaacctttgatgcagtattactggatgcgccctgcggcggcgaaggt
accatcagaaaagatcccgacgcactaaaaaactggtctcaggcatccattgactccatc
agcgcactgcaagagcaattaattgacagtgccttcagagcactaaagccaggcggctgc
ctggtctattccacctgtaccctgaatcagcaggagaaccagtctgtttgccagtatctt
ctggacagatatgccgattcggtagaggtggaagccctggataagcttttccctggtgca
gagaaggccgtcaccgaacaaggatatctgcatatctggccgcagctgtttaacagcgaa
ggcttttttgttgcccgatttcgcaaaacccgtgatcttggtcttcaacttcctgctccc
agaaaggcacaactgcccttttccccggcgagtaaaaagcaacaacagcaacttaatgac
tatctgaccgggcagttcggttgcagacttcctgaagagtccaggctttttatcaaagag
caggattattggttgtttccccaacagacagaaaacctgctcggccagttccgtttccag
cgtgtcggtctgaaaatcgccagtcggcataaatccggttttcggttaagccatgatgcc
gccatggcgctgggcatgaactttacccgtcagtgtctggccctcagcacagatcaactg
cgccagtactaccagggccgggacctcacggcagacactaagccaccgcaaggagagtta
cttttaacctggcaaaataccccggtgggtctggcaaaaggtttagggttgaagataaaa
aacaccctgccccgtgagctggtcagagataacctgcctgactggtccgctgatggccag
ccccacaacttataccctgaacctatggaataa
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