Lentibacter algarum: LentiSH36_00705
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Entry
LentiSH36_00705 CDS
T09071
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lalg
Lentibacter algarum
Pathway
lalg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LentiSH36_00705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lalg03400
]
LentiSH36_00705
DNA repair and recombination proteins [BR:
lalg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LentiSH36_00705
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LentiSH36_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
AAA
AAA_16
pP_pnuc_1
Kinesin
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
WIF31188
LinkDB
All DBs
Position
complement(703887..706085)
Genome browser
AA seq
732 aa
AA seq
DB search
MPHVHTDASPALTNAPSGDVRSREKLEGGKRFVMHTPFTAAGDQPRAIAELSEGIKDGER
NQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEMKGFFPDNAVEYFVSFY
DYYQPEAYVARSDTFIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLIVGESYDQRSVMADLVAQQYKRNDAGFQRGSFRVRGDSLEIWPAHLDDRAWK
LSFFGEELESIQEIDPLTGEKAGSMDKVRVYANSHYVTPKPTLLQAIQQIKKELRVRLDQ
FTNEGKLLEAQRLEQRTNFDLEMMEAQGFCNGIENYSRYLTGRLTGEPPPTLFEFIPDNA
IVFADESHVSVPQIGGMYKGDYRRKFTLSEHGFRLPSCMDNRPLKFEEWDAMRSQSVFVS
ATPSKWELEQSGGVFAEQVIRPTGLLDPMIEIRPVETQVDDLLDEVKRVAAAGYRVLCTT
LTKRMAEDLTEYMHEQGVRVRYMHSEIDTLERIEILRDLRLGAFDVLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADKITGSMERAMGETDRRRE
KQIAYNIEHGITPETVKKNVDDILSGLYQGDVDMNRVTAQIDPALQGSNLKAILDGLRTD
MRKAAENLEFEEAARLRDEVKRLEAVDLAVHDDPLARQSAIEAAGAEATKARGRSTAGKP
GQRGGNVKRRGR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgtccatacagatgcctcccccgccctaacaaacgccccctcaggtgatgtg
cgcagccgtgaaaagctcgaaggtggtaagcgtttcgtgatgcacaccccgtttaccgca
gcaggcgatcagccccgtgctatcgcggagctgagtgaagggatcaaggacggcgagcgc
aaccaagttctgcttggcgcaaccggcactggcaagacattcacaatggccaaagtcatt
gaagaaactcagcgcccagcgattatccttgccccaaacaagaccctcgcagcgcagcta
tatggcgagatgaaaggcttcttccccgacaacgcagtcgaatatttcgtcagtttttat
gactattaccagcccgaagcctatgtcgcccgctctgacacgttcatcgagaaagaaagt
cagatcaacgaacagatcgaccgcatgcgccactcggccacgcgcgctttgcttgagcgc
gacgatgtcatcatcgtggcatctgtctcctgcatttacgggattggctctgtcgaaacc
tacggcgcaatgacacaagacctaatcgtgggcgaaagctatgaccaacgctctgtcatg
gccgacctcgtggcgcagcaatacaagcgcaacgatgctggttttcagcgaggctccttc
cgcgtgcgcggcgacagcctcgagatttggcccgctcaccttgatgaccgcgcatggaaa
ctcagcttctttggcgaagagctcgagagcattcaagaaatcgatccactcacaggcgaa
aaagccggcagcatggacaaagtccgcgtttacgcgaattcacactacgtgacgcccaag
ccaacgctccttcaagccatccagcaaatcaaaaaagagctgcgcgtgcggctggatcaa
ttcacgaacgaaggcaagctcctcgaagcccagcgccttgagcagcggaccaattttgac
cttgagatgatggaggcccaaggcttctgcaacgggatcgaaaactactcgcgctatctg
acgggtcgcctgacaggtgagccgccccccactcttttcgagtttatcccagacaatgca
atcgtctttgccgacgaaagccacgtttctgtgccccaaattggcggcatgtataagggc
gactaccgccgcaagttcacgctttctgagcatggcttccgcctgccctcttgcatggac
aaccgcccattgaagtttgaggagtgggacgcgatgcgctcccaatccgtctttgtttcg
gcaactccgtcaaaatgggagcttgagcagtcaggcggggtctttgccgagcaagtgatc
cgccccacagggcttttggacccgatgatcgagatacgccctgttgaaacacaggtggac
gacctgctcgatgaagtaaaacgtgtggccgccgctggctaccgcgtgctctgcaccacc
ctcaccaagcgcatggctgaggacttgaccgaatacatgcatgagcaaggtgtgcgtgtg
cgctacatgcactctgaaatcgacactctcgaacggatcgaaatcctacgtgatctgcgc
cttggcgcgttcgatgtactgatcgggatcaaccttctgcgtgagggcctcgacattccc
gaatgcggccttgttgccattctggacgccgacaaagagggttttttgcgctccgaaacc
tcgctcatccagacaatcggtcgcgcagcgcgcaacgccgagggccgcgtgatcatgtat
gccgacaaaatcaccggctcgatggagcgcgccatgggcgagacagaccgtcgccgcgaa
aaacagattgcctataatattgaacatgggatcacacccgaaactgtgaagaagaacgtc
gatgacatcctgtctggcctctaccaaggcgatgtcgacatgaaccgcgtcaccgcacag
atcgaccctgccctgcaaggtagcaacctcaaagcaatcctcgacggcctgcgcaccgac
atgcgcaaagctgcggaaaatctggagttcgaagaagccgcaaggctgcgcgacgaggtg
aaacggctcgaagccgtcgatttggccgtccacgatgaccccttggcgcgccaatccgcc
attgaggccgctggcgccgaagccaccaaagcacgcggccgctcaacggctggcaagcca
gggcaacggggtggaaatgtgaaacgtagggggcggtag
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