Companilactobacillus allii: BTM29_11590
Help
Entry
BTM29_11590 CDS
T05413
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lalw
Companilactobacillus allii
Pathway
lalw00260
Glycine, serine and threonine metabolism
lalw00460
Cyanoamino acid metabolism
lalw00630
Glyoxylate and dicarboxylate metabolism
lalw00670
One carbon pool by folate
lalw00680
Methane metabolism
lalw01100
Metabolic pathways
lalw01110
Biosynthesis of secondary metabolites
lalw01120
Microbial metabolism in diverse environments
lalw01200
Carbon metabolism
lalw01230
Biosynthesis of amino acids
lalw01240
Biosynthesis of cofactors
Module
lalw_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lalw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BTM29_11590 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BTM29_11590 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BTM29_11590 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BTM29_11590 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BTM29_11590 (glyA)
Enzymes [BR:
lalw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BTM29_11590 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
APX73154
UniProt:
A0A1P8Q5M2
LinkDB
All DBs
Position
2331625..2332854
Genome browser
AA seq
409 aa
AA seq
DB search
MQYSSGDKEIFDLIGKEEDRQNRNIELIASENIVSDNVRKAQGSVLTNKYAEGYPGKRYY
GGCEYIDQIETIAIERAKKLFGAEYVNVQPHSGSQANAAAYQAVLKPGDSVLGMDLNAGG
HLTHGSKVNFSGKMYKFHSYGVNDEGFIDYDDVQKIAEEVKPKLIVAGASAYSRIIDFKK
FKEIADSVGALLMVDMAHIAGLVAVGLHPTPIGVADIVTTTTHKTLRGPRGGMIFAKPEL
GKKINSAIFPGTQGGPLEHVIAAKAVAFGEDLQPQFKDYIEQVVKNAAAMAEVINDSEDL
SVLTGGTDNHLLNVVLTKTDMNGMEVQDMLDSIHITSNKEAIPNDPLPPKYTSGLRLGTP
AITSRGFDEDDCREVAHIIVDAIKYHNDSDKLEELDKRTKALTDKHPIK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatagctcaggcgataaagaaatttttgatttgattggaaaagaagaagaccgt
caaaaccgtaatatagaattgattgcttctgaaaatattgtttcggacaatgttagaaag
gctcaaggttcagttctaactaacaaatatgctgaaggttatcctggcaagagatattat
ggtggttgtgaatatattgaccaaatagaaacaatagctattgaacgtgccaagaaatta
tttggtgctgaatatgttaacgttcaacctcactcaggttctcaagcaaatgcggccgca
taccaagcagtcttgaaaccaggagattctgtactaggtatggatcttaatgctggcgga
catcttacacacggttcaaaggttaacttttcaggtaaaatgtacaagtttcattcatat
ggagttaatgacgaaggattcatagactatgatgatgtacaaaagattgctgaagaggtg
aaaccaaaattaattgttgctggtgcttcagcatatagccgtataattgattttaaaaaa
ttcaaagaaattgctgattcagttggcgctttactaatggttgatatggcccatattgcc
ggactagttgctgttggattacacccaacaccaattggtgtcgctgatattgtgactaca
actacccataaaacacttagaggacctcgtggcggaatgatttttgctaaaccagagctt
ggtaaaaaaatcaattctgcaattttcccaggaacacaaggtggcccactggaacacgta
attgctgctaaagctgttgcatttggtgaagacttacaaccacaattcaaggattatata
gaacaagttgttaaaaacgcagctgcaatggctgaagttataaacgattcagaagactta
tcagttttaactggtggaacagataatcaccttctcaacgttgttttaacgaaaactgat
atgaacggtatggaagttcaagacatgcttgattccatccacatcacatctaacaaagaa
gccattccaaatgacccattgccacctaaatacacatcagggcttcgtttaggaactcct
gcaatcacaagtcgtggatttgatgaagatgattgtcgtgaagttgcacacattattgta
gatgctattaagtatcataatgacagtgacaaacttgaagaacttgataagagaacaaag
gcacttactgataaacatccaattaaataa
DBGET
integrated database retrieval system