Lactobacillus amylovorus GRL 1112: LA2_01300
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Entry
LA2_01300 CDS
T01371
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lam
Lactobacillus amylovorus GRL 1112
Pathway
lam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LA2_01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lam03021
]
LA2_01300
03400 DNA repair and recombination proteins [BR:
lam03400
]
LA2_01300
Transcription machinery [BR:
lam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LA2_01300
DNA repair and recombination proteins [BR:
lam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LA2_01300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF5611
DUF3632
TPR_20
Motif
Other DBs
NCBI-ProteinID:
ADQ58255
UniProt:
E4SKI9
LinkDB
All DBs
Position
261950..262507
Genome browser
AA seq
185 aa
AA seq
DB search
MGLDKFKDKNRDELSMIEVARAILEDNGKRMAFADIVNAVQKYLNKSDEEIRERLPQFYT
DMNTDGEFISMGENVWALRSWFPYESVDEEVNHPEDEDEDDARKHHKRVNAFLASATGDD
DIIDYDNDDPEDDDLDATADDSDDDYGDDDSDYDEDNDDTDDVLPDGIEGQLSQLNDDDD
DEEDN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgggattagacaaatttaaagacaaaaaccgcgacgaattatcaatgatcgaagttgct
cgtgcaattttggaagataatggtaagagaatggcatttgccgatattgttaatgccgta
caaaaatacttgaacaagagtgacgaagaaattcgtgaacgtttgccacaattctatact
gacatgaacaccgatggtgaatttatttccatgggtgaaaatgtttgggcacttcgctca
tggttcccatacgaatcagttgacgaagaagttaaccacccagaagacgaagacgaagac
gatgcacgtaagcaccacaagagggttaatgccttcttagccagtgcaactggtgacgat
gacatcatcgactacgacaatgacgacccagaagacgacgacttagatgccactgctgat
gatagcgatgacgactacggcgacgacgattctgattacgatgaagataacgatgatact
gatgacgtattgccagacggtatcgaaggtcaattgtcacaattaaacgatgacgatgat
gacgaagaagataattaa
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