Lupinus angustifolius (narrow-leaved blue lupine): 109334160
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Entry
109334160 CDS
T04664
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109334160
09122 Translation
03013 Nucleocytoplasmic transport
109334160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109334160
03041 Spliceosome [BR:
lang03041
]
109334160
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109334160
Spliceosome [BR:
lang03041
]
Complex C
Other components
EJC/TREX
109334160
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109334160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
109334160
NCBI-ProteinID:
XP_019425294
UniProt:
A0A1J7GQN7
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Position
LG19:1538464..1541130
Genome browser
AA seq
599 aa
AA seq
DB search
MEVLKRAIMEQPGPPETFALQMVQEVINPPPKQSKLAQDENQFLENVLRLLLQEFVSASG
EKIMQFGQSIDDSETETTQGHIPRLLDITLYLCEKEHIEGGMIFQLLEDLTEMSTMENCK
DVFGYIESKQDILGKRELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLARFFPLS
ERSALNIKGVFNTTNVTKYEKEPLEGICIDFNFYQTFWGLQEYFSSPTSVNHAPAKWKKF
TTSLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQ
CLILFDYLKAPGKNDTDLPSESIKEEITSCEERVKKLLQLTPPKGREFLCKIEHILEREK
NWVWWKRDGCLPYERQPIEKKTVQGDKKRRPRWRLGNKELSQLWKWADQNPNALTDPHRV
QTPSIMEYWKPLAEDMDPSAGIEAEYHHKNKRVYCWKGLRLAARQDLEGFSKFTDLGIEG
VVPLELLAPDVRSKYQAKPNDRGKRSKKEETKANVHQVEENQIATPANEIDGEDVKTDTT
ATPMEFDATTVIGTQGGPTPDEHQKQSSDNDVGQEAGQLEADAEVEAGIIDGETDADID
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggaggtacttaaaagggccataatggagcagcctgggccacctgaaacttttgcattg
cagatggttcaagaagtaataaatccgcctccgaaacaatcaaaactggctcaagatgag
aatcagtttctcgaaaatgttctacggttgctactccaggaatttgtgtcagcgtctggg
gagaaaataatgcagtttggtcaatcgattgatgatagtgaaacggaaactactcagggc
cacattcctcgccttcttgatatcactttatatctttgtgaaaaggagcacattgaaggt
ggtatgatctttcagctgttggaagatttgacagaaatgtctacgatggaaaactgcaaa
gacgtttttgggtatattgagagcaaacaagatattttggggaagcgagagctttttgct
cgaggaaaacttgtgatgctgagaacctgtaatcagcttcttcgccggttgtcaaaggca
aatgatgtggtgttttgtggaagaattctcatgtttttagctcgtttctttccattatcc
gagcggtcagctttgaatatcaaaggagttttcaacacaacaaatgtaacaaaatatgag
aaagaacccctggagggaatttgtatcgatttcaacttttaccaaactttctggggctta
caggaatatttttctagccctacttctgtaaatcatgctccggctaagtggaagaaattc
acaaccagtttgtcggttgtactgaatacatttgaagcacaacctttaagtgatgaagag
ggagatgctaataatttggaggaagaggcagttaattttagcataaaatatctcacgagc
agtaagctaatgggtctagaactaaaggatccaagttttcgtcgtcacgttcttgtgcag
tgtctcatattgtttgattatttgaaggcccctggaaaaaatgacacggatttgccatct
gaaagcataaaagaagagattacatcgtgcgaggagcgtgttaagaaacttcttcaactg
actccacccaaagggcgagagtttctttgcaaaattgagcatatattggaacgagaaaag
aattgggtgtggtggaagcgtgatgggtgcctaccatatgaaagacaacctatcgagaag
aaaacagtacaaggggacaagaagcgtaggccaagatggaggttgggtaacaaagaattg
tctcagttgtggaagtgggcagatcaaaatccgaatgctttaacagaccctcaccgtgtt
caaacaccttcgatcatggagtactggaaacccttggctgaagatatggatccttctgct
ggaatagaagctgaatatcatcacaagaataaacgggtctactgttggaaaggtcttaga
cttgcagcacggcaggatttggagggattttctaagttcactgatcttggcattgaaggg
gttgtaccgctagaacttttggcaccggatgtccgatctaaataccaagctaaaccaaat
gacagagggaaacgtagtaaaaaggaagaaaccaaagccaatgttcatcaagttgaggaa
aatcagattgctacacctgcaaatgagattgatggtgaggatgttaaaactgataccaca
gcaacacccatggaatttgatgccaccaccgtcattggcactcaaggtggtccaacacca
gatgaacatcagaagcagagctcagacaatgatgttggccaggaagcaggccagttagaa
gcagatgctgaagttgaggctggcatcatagatggagagacagatgcggatattgattaa
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