Lupinus angustifolius (narrow-leaved blue lupine): 109347524
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Entry
109347524 CDS
T04664
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109347524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109347524
03019 Messenger RNA biogenesis [BR:
lang03019
]
109347524
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109347524
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
109347524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
Motif
Other DBs
NCBI-GeneID:
109347524
NCBI-ProteinID:
XP_019442970
UniProt:
A0A4P1RJ52
LinkDB
All DBs
Position
LG05:complement(3828610..3837913)
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AA seq
1037 aa
AA seq
DB search
MESSRRPFDRSRDQPGPKKPRLMEQLGDRASNNPSVRSFPQRQVTSSASRFRTNDRDLER
INFDRGGYQPQPLAPHQELVHQYKTALAELTFNSKPIITNLTIIAGENQIAAKAIAATVC
ANIIEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAGRLPEVFCKVYRQVDPSLHQSMRHLF
GTWRGVFPPQTLQTIEKELGFAPAVNGSASASATLRSGSQSLPPQSIHVNPKYYLERQCL
QQSGRTKGVVDDMTGATANSNEDPERADRALGAARQWVGPSVNMDLYENNERTYRDALND
PVPENSIVASYGGNEYGSDISRNLGSGMGRAGSRVTELGRDKSSLKSSSGVAGTISGKRN
GFSLRHNFSSTEAHLQPTQQFPSIQNNVMSSSWKNSGEEEFMWDEMHSGLTGHGAPKATN
NGSKDPCTNDDENLEVEDPLQIRNPFGGNVDMEISTEYLATDKQLPASRRHPSLSWKLQE
QHSVDELDQKPGQSDGFVFTQGLKGRTISSAARMGNRPFLPNATIGLAGTVVEQFHSMGA
ESPSGQPPLGQESSSPPASVHYHPYKMQDLAKQNRPQTLKTSKFLGGLQSQYIKDSLPTL
PSNDQVGNLPRSQQKELQGPFSSTKTFQPQHPQLLGSSHTEVMAKTEKSPLSKVSLAIET
PEQSSTSSMEDETVKSGIFSNMPITRTLPTTTQDTRNFPSKLGVRPTRSGGPSPAKLISS
VSAITSPSSLGSHNDSSSALPEVPQRKSAKLPIVSPLPPPSSNVSSTSAQTSSATNNTAN
SIANLLSSLVAKGLISAETESPPKVASKMQTRLEDQSKSVTTSSSLPVASVSGSAAVLEP
STKDKEDDTAKTPISLSESTSTEIRDFIGFEFKPRLIRELHPCVIKGLFDDLPHQCSVCG
LRLKFQEEFNRHLEWHATREGEQNGSRRWYLKSSDWVDGKAYYPSEHECADSVDDTYSEE
EDKCQEDAMVPADENQCLCVLCGELFEDFYSQGNGEWMFKGAVYMTNSDSNSDLEIGNAS
TASGPVIHARCLSELHI
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcacgtagaccgttcgatagatcgagagatcaacccggtccgaagaagcct
cggttaatggaacaactcggggaccgtgcttcgaataatcccagtgttcgatcttttcct
cagcgacaagtgacttcttctgcatcaagatttagaacaaacgacagagatttggaaaga
atcaattttgatcgcggtggttatcagccgcagccgttggcgccgcatcaggagcttgtg
catcagtataagacagcccttgctgagcttactttcaactcgaaaccgattattaccaac
ttgacaataattgcaggggagaaccaaattgctgctaaggctattgctgctactgtttgt
gctaacattatagaggttcctagtgaacaaaagctgccatctctatatctcttagacagt
attgttaagaatattgggcgggattatataaaatactttgctggcagactacccgaggta
ttctgcaaggtataccgacaggttgatccttctcttcatcaaagtatgaggcatcttttt
ggaacttggagaggagtctttcctcctcagacccttcagactattgagaaggaactgggc
tttgctccagcagtcaatggttctgcttccgcatctgctacacttaggagtggttcacag
tcacttccgccacaaagcatccatgtgaatcccaagtattatttagaaaggcagtgttta
cagcagtctggcaggactaaaggagttgttgatgatatgactggagctactgcaaactca
aatgaggatccagaaagggcggatagagctttgggtgctgcacgacaatgggtcggtccc
agtgttaacatggacttatatgaaaataatgagcgcacttatagagatgcattaaacgac
cctgttccggaaaacagcattgttgcatcctatggaggcaatgaatatggttctgatatt
tcaaggaatttgggctcgggtatgggcagagctggtagtagggtcactgagttaggacgt
gacaaaagttcattgaaatccagtagtggtgttgcagggacaatatctggtaaaagaaat
ggtttcagtctcaggcataatttttccagtactgaggctcatcttcagccaacacagcaa
tttcctagcatacagaacaatgttatgtcaagtagctggaaaaattctggtgaagaggag
ttcatgtgggatgagatgcactctggattgactggtcatggtgcacccaaggccacgaac
aatggaagcaaagacccttgtaccaatgatgatgaaaatctggaagttgaagatcccctc
caaatccgaaacccttttgggggaaatgttgatatggaaatatccactgaatacctagcc
actgataaacaattacctgcatctcgccgtcatccatcattatcatggaaattgcaggag
caacactcagttgatgagttagatcagaaacctggtcaatcagatggatttgtgttcact
caaggtttaaaaggcagaacaatttcctctgctgccaggatgggtaatcgacctttcctg
ccaaatgcaacaataggattggcaggaactgttgtagagcaatttcattccatgggagct
gaatccccctctgggcagccacctttgggacaagagtcttcatcaccaccagcaagtgtg
cactaccacccttataaaatgcaagatttggcaaagcaaaaccgtccccagactcttaaa
acatctaaatttttgggaggtctgcagagccaatatattaaagattccttacctaccctt
ccttctaatgatcaggttggtaacttgccaagatcacagcaaaaggagttgcaaggtcca
ttctcctcaacaaaaacctttcagccacagcatccgcagttgctgggctcttctcacact
gaagttatggctaagactgagaagtcacccttgtctaaagtttctctagctatagaaact
ccagagcagtcaagcacaagtagtatggaagatgaaactgtgaagagtggaatcttctcc
aacatgccaattactaggactcttcctacaactactcaggatacaaggaattttccatct
aaattaggggttcggcctacccggtcaggtgggccttcccctgccaaactaatttcttct
gtgtctgcaataacatcaccatcttcattaggttctcataatgattcttcatctgctctt
cctgaagtgccgcaaagaaagtctgcaaaactaccaattgtatcacctctgccaccacct
tcctctaatgtcagcagcacctcagctcagacatcaagtgctaccaataatactgcaaat
tcaattgctaatcttttaagctcattagttgcgaagggtttgatttcagcagaaacagag
tcaccaccaaaggtagcatctaagatgcagactcgattagaagatcagagcaaaagtgtt
acgaccagtagttctttgcctgttgcttcagtgtctggttctgcagcagtcctagaacct
tctaccaaagataaggaagatgatactgcaaaaacccctatatccctttctgaatcaacc
agcacagaaatcagagattttattggctttgagtttaagcctcgtctaatccgagaattg
catccatgtgtaattaaaggattatttgatgatcttccacatcaatgtagtgtttgtggc
cttagacttaagttccaagaagagtttaatagacatttggagtggcatgccacaagagaa
ggagaacaaaatggttcaagaagatggtatctaaagtcaagtgattgggttgatggcaag
gcttattatccatctgagcatgagtgtgctgattctgtagatgatacctatagcgaggaa
gaagacaagtgccaagaggatgcaatggttccagcagatgaaaaccaatgcttgtgtgtg
ttgtgtggtgagctatttgaagatttttactctcagggaaatggtgagtggatgtttaaa
ggggctgtttacatgactaactcagatagcaatagtgatttggagattggaaatgcgagt
actgcaagcggtcccgtcattcatgcaagatgcttatcagaacttcatatctag
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integrated database retrieval system
