Lupinus angustifolius (narrow-leaved blue lupine): 109348571
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Entry
109348571 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109348571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109348571
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109348571
Spliceosome [BR:
lang03041
]
Complex A
U2 snRNP components
U2 related factors
109348571
Complex B
109348571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109348571
NCBI-ProteinID:
XP_019444598
UniProt:
A0A1J7HEA3
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All DBs
Position
LG06:complement(374859..379947)
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AA seq
1132 aa
AA seq
DB search
MDEVKKHKSRKDGDSKRSHRDPDRTADKRDSESRRHEKDKNSDSEDRYDRDREKRKDKER
TRVKDVDKDRTREKKVERDREDKERERSDRVREKERDKVKEKKREKEREREREREKEREK
ERERERERERERERERERERERKERVREKEIEREKGRRGHEREKRRNVDNKNSDDESRER
DRKRHRKDDDDVYKGRDRERIVSKSHRQTENTEASPRKKSSEDEDGTKDDESKPTREEEM
EIEQRRLDDEMEKRRRRVQEWQELKRKREETEREKQGEASADEPESRKTWTLEGESDDEE
GPAAGKQDTAMDVDEDEKPADEGPTDLVVSHDNGTVASDLQDGNTGAPEDEEIDPLDAFM
NSMVLPEVEKLNNAAALSLTDKAADLNPKDKEDEQSRGGQARKGSNKSIGRIIPGEEFDS
DYADLEFEGDPSDEDDDEFMKRVKKTKAEKLSIVDHSKIDYMPFKKNFFIEVKEISKMTL
EEVALYRKQLELKIHGKDVPKPVKSWHQTGLTSKILETIKKMNYEKPMPIQAQALPIIMS
GRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKF
SKVMGIRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYLVM
DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSV
VNKDITQTVEVRPENERFFRLLEILGEWCEKGKILIFVHSQEKCDVLFKDLLRHGYPCLS
LHGAKDQTDRESTISDFKTNVCNLLVATSIAARGLDVKELDLVINFDVPNHYEDYVHRVG
RTGRAGRKGCAITFISEEDARYAPDLLKALELSEQIVPNDLKALADSFMAKVNQGLEQAH
GTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEDKSDSEDEDDGIRKAGGDISQHPALA
QILAAQKVNSPAMPTPISVGQSISNGGLPSLSAVLGLQTATVLPGNDVAARAALAAINLQ
HHLAKIQSEALPEHYVAELEINDFPQNARWKVTHKDTLGPISDWTGAAITTRGQHFQPGK
VPGPGERKLYLFIEGSSEQSVKRAKAELKHVLEDFTNLQLPGGTQPGKYSVV
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttaagaagcataagtcaaggaaagatggggattctaagcggagtcaccgt
gatccagatcgtactgcggataagagagattctgagagccggcgacatgagaaagacaag
aatagtgattctgaagataggtatgatagagatagggagaaacgtaaggataaggaaagg
acgcgagtcaaggatgtcgataaagatcgaactcgagagaagaaagtcgaaagagatagg
gaggacaaggaaagggagaggagtgatagggtgagagaaaaagaaagagataaggttaag
gagaagaaacgagagaaagaaagggaaagggagagggaaagggagaaggaaagggagaag
gaaagggagagggaaagagaaagggagagggaaagggaaagggagagggagagggagagg
gaaaggaaggagcgtgtgagggagaaggaaatagaaagagaaaaagggaggagaggacat
gagagggagaagcgtaggaacgttgataacaaaaacagcgatgatgaatcgagggagaga
gataggaagcggcataggaaagatgacgatgatgtttacaaggggcgagatagggaaagg
attgtcagcaagtcgcacaggcaaactgagaatactgaagctagcccaaggaagaagagc
agtgaagatgaggatggtactaaagatgatgagagtaaacctacccgtgaagaggagatg
gagattgaacaaaggagattggacgatgaaatggaaaagaggcggaggagagttcaagag
tggcaagagcttaagaggaagagagaagaaacagaaagagaaaagcaaggtgaagccagt
gctgatgaacctgagtcgagaaagacctggacccttgaaggggaatctgatgatgaagaa
ggaccggctgctgggaagcaggacacagctatggatgtagatgaagatgaaaaacctgct
gacgagggacctacggatttggtggtaagtcatgataatggaacagttgcgtccgactta
caggatggaaatactggtgctcctgaagatgaagaaatcgatccattggatgctttcatg
aattctatggttcttcctgaagttgaaaagctgaacaatgctgcagccttgtcacttact
gataaagctgctgacttgaatcccaaggataaggaggatgagcaaagtcgtggtggacag
gcaaggaaaggttcaaataaatcaatagggagaataattcccggtgaagagtttgactca
gattatgcagatcttgaatttgagggggatccatccgatgaagatgatgatgagttcatg
aaaagagtgaagaaaacaaaagctgagaagctttctatagttgaccactcgaaaattgat
tatatgccattcaagaaaaacttttttattgaagtgaaagagatatcgaagatgactctt
gaagaagttgcattatataggaagcagttggagttgaagatacatggaaaggatgtgcca
aagcctgtaaaatcatggcaccagactggacttaccagcaaaattttggagacaataaag
aagatgaactatgaaaagccgatgccaattcaagctcaggcgctgccaataatcatgagt
ggtcgagactgcataggcattgctaaaactggttccggcaaaacacttgcttttgttctg
ccaatgttgaggcatattaaggatcagccaccagttgttgcaggagatggacctattggg
cttattatggcccccacaagggagcttgttcaacagattcacagtgacataaagaagttt
tcaaaggtaatgggtatcaggtgcgtgcctgtctatggaggttctggtgtcgctcaacaa
attagtgagttgaaacgcggtgctgagatagtggtttgtactccaggtaggatgatcgac
atactatgcaccagtagtggaaaaataaccaacctgcgtcgagtcacttatctggttatg
gatgaggctgatcgaatgtttgacatgggatttgaacctcaaattacacgaattgttcag
aatatccggcccgatcgtcaaacggttctcttctctgctaccttcccccgccaggtcgaa
attctggctcgtaaggtgttgaataaacctgttgaaatacaagttggtgggaggagtgtt
gtgaacaaagacatcacacagactgttgaggtgaggccggaaaatgagaggttctttaga
ctcttagaaatattgggggaatggtgtgagaaaggaaagattttgatatttgttcactca
caggagaaatgtgatgttttgttcaaggatttgctcaggcatggttatccatgcctttct
cttcatggggcgaaggatcagacagaccgtgaatcaacaatttctgattttaaaaccaat
gtttgcaatttgttggttgcaacaagtattgctgccaggggattagacgtcaaggagctt
gatttggtcattaattttgatgttccaaaccactatgaagattatgtacatcgtgttggg
cgcactggccgtgctggccgaaagggttgtgccattacatttatttctgaggaagatgca
agatatgcaccagatctgttaaaagccttggagctatctgagcagattgttcccaatgac
ctgaaagctcttgctgatagctttatggcgaaagtgaatcaaggacttgagcaagcccac
ggaactggttatggaggcagtggatttaaatttaatgaagaggaagacgaggtgaggaaa
gcagcaaagaaagcacaagccaaagaatatgggtttgaagaagacaagtcagattctgaa
gatgaagatgacggtatcaggaaggcaggtggtgacatctcacaacatccggctcttgct
cagattcttgctgcccagaaagtgaattctccagcaatgccgactcccatctccgtgggc
cagtcaatttcaaatggtgggctaccttctttgtcggctgttcttggtctccagaccgca
acagtcttgcctgggaatgatgtggcagctcgagcagcattagctgctataaacctgcag
caccacttagcaaagatacaatctgaagcattgccagagcattatgtggccgagttggag
ataaatgatttcccccagaatgctcgctggaaagtgacacacaaggatactttaggccct
atttctgactggactggagctgcaattaccactagggggcagcattttcaacctggcaag
gtcccgggacctggagaacgcaaactgtacttgttcattgagggttccagtgagcagtct
gttaagagagctaaagcagagttgaagcatgttttggaagacttcacaaatttgcaactt
cctggtggaactcaacccggcaaatactctgttgtatga
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