Luteibacter anthropi: KR767_00365
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Entry
KR767_00365 CDS
T08319
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lanh
Luteibacter anthropi
Pathway
lanh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KR767_00365 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lanh03400
]
KR767_00365 (mfd)
Enzymes [BR:
lanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KR767_00365 (mfd)
DNA repair and recombination proteins [BR:
lanh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
KR767_00365 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
UvrB_inter
DEAD
MFD_D3
Helicase_C
CarD_TRCF_RID
ResIII
UB2H
AroM
ERCC3_RAD25_C
AAA_30
RecG_dom3_C
AAA_22
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
URX64511
LinkDB
All DBs
Position
73629..77078
Genome browser
AA seq
1149 aa
AA seq
DB search
MPVAIPRPPLPANAKTRRYWAVPNGSSWALEIAEAARAHDGLLVVVTRDTRSADNLESEL
GVFAGELSVLHFPDWETLPYDVFSPHPEVVSQRIATLYRLPSVKRGVLVVPVATLMQRIA
PRSHITGSGLVLRKGQKLDIVAEQRRLEAAGYRNVPQVSEPGDFAVRGALIDIYAMGASE
PYRVELFDDEVESIRTFDPETQRSQQQVENVELLPAREFPVTEEAAKTFRAALRDRFPID
VRRCPLYQDMKEGVTPGGIEYYLPLFFSATETLFDYLAGETLFVLGDGTLDAADAFWTQV
AERYDQRAHDIERPVLPPADIYLAPEQLRERLNKQPRIDVVAKDHEHAVDLGTQPAPELP
INRKGEEPGTALRHFLAHYPGRVLVAADSAGRREALIEQLAGAGMKPANIDGWKAFLASD
EKLTITVASLEQGFALTKPAVTVLTERELFGERVRTDRRKRAGAARDPESIIKDLTELSI
GSPIVHIDHGVGRYQGLLSLDVGDMPGEFLTIEYAKGDKLYVPVAQLGLVSRYTGTAPEL
APLHSLGGDAWERARKKAAEKVRDVAAELLAIYAQREAKQGEALPVDRQMIEEFAATFPF
EETADQQRAIDAVIADLARPRAMDRVVCGDVGFGKTEVALRAAFAAATAGKQVAVLVPTT
LLAQQHYRNFADRFADWPVRVEVLSRFKSKKEVDNALERLADGQVDVMVGTHKLLQADIR
FKNLGLVIVDEEQRFGVRQKEQLKKLRAEVDLLTLTATPIPRTLNMAMSGLRDLSIIATP
PAHRTAVRTLISTYQPAMIREAIQRELSRGGQVYFLHNEVESIERIARELGELVPEARIR
VAHGQMPERELEQVMADFHRQRFNVLVSTTIIESGIDIPTANTIIVNRADRFGLAQLHQL
RGRVGRSHHRAYAYLIVPDRKAMTADAEKRLEALASLEELGAGFTLATHDLEIRGAGEML
GDEQSGQIQEIGFGLYTELLDRAVRALKSGKVPDFDLTSEHETEVELHLPALIPEDYLPD
VHTRLTLYKRIASAKDDEGLRELQVEMIDRFGLLPDQTKCLFAVAQLKLMATPLGIRKLD
FGANGGRVTFRDKPDIDPMALIKLIQQQPRVFKMDGQDKLRVIMDLPGSSERIRAAQETL
VSLGARRPS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtagcgattccccgtccgcccctccccgccaacgccaagacccgccgctactgg
gcggtgccaaacggctcctcctgggccctggaaatcgccgaggccgcccgggcgcacgat
ggcctgctcgtggtggtcacccgggatacccgcagcgccgacaacctggaaagcgaactg
ggcgtctttgcgggcgaattgtccgtgctgcacttccccgactgggaaaccctgccctac
gacgtcttcagcccccaccccgaggtggtctcccagcgcatcgccaccctgtatcgcctg
ccttcggtaaaacgcggcgtgctggtggtgccggtcgccaccctcatgcagcgcatcgcc
ccccgcagccacatcaccggctccgggctggtgctgcgcaagggccagaaactcgacatc
gtggccgaacagcgccggctggaggctgccggataccgcaacgtgccgcaggtgtccgag
ccgggcgacttcgccgtgcgcggcgccctcatcgacatctacgcgatgggcgccagcgaa
ccctaccgtgtggagctgttcgacgacgaagtggaatcgatccgcaccttcgatccggaa
acccagcgctcgcagcagcaggtcgaaaacgtggaactgctgcccgcccgcgagttcccg
gtgacggaggaagccgcgaagaccttccgcgccgcattgcgcgaccgctttcccatcgac
gtgcgtcgctgtccgctgtaccaggacatgaaagaaggcgtcacgcccggcggcatcgag
tactacctgcctctgttcttcagcgccacggaaaccctgttcgactacctcgccggtgaa
acgctgttcgtgctgggcgacggcacgctcgacgccgccgacgccttctggacacaggtg
gccgagcgctatgaccagcgcgcgcacgatatcgaacgcccggtcctgccgcctgccgat
atctatctcgccccggaacaactgcgcgagcgcctcaacaagcaaccacgcatcgatgtc
gtggcgaaagaccacgagcacgccgtggacctgggcacgcagccagctccggaactgccg
atcaaccgcaagggcgaggagcccggcacggccctgcgccatttcctggcgcattatcct
ggccgcgtgctggtggccgcggattccgccggtcgtcgcgaggcgctgatcgagcagctc
gcaggcgccggcatgaaaccggcaaacatcgacggctggaaagcctttctcgccagtgac
gagaagctgaccatcacggtcgcgtcgctggaacagggtttcgcacttacgaagccggcg
gtcaccgtgctcaccgaacgcgagctgttcggcgaacgcgtacgcaccgaccggcgcaag
cgcgcaggcgccgcgcgcgatccggaaagcatcatcaaggacctcaccgagctgtccatc
ggctcgcccatcgtccatatcgatcacggcgtgggtcgctaccagggcctgctgtcgctc
gatgtgggcgacatgcccggtgaattcctcaccatcgaatacgccaagggcgacaagctc
tacgtgcccgtggcacagctggggctggtcagccgctacaccggcacggcaccggaactg
gcgccgctgcactccctgggcggcgacgcctgggaacgcgcacgcaagaaggccgccgaa
aaggtgcgcgacgttgccgccgagctgctggcgatctacgcgcagcgcgaagccaagcag
ggcgaagccctgccggtagacaggcagatgatcgaagaattcgccgccaccttccccttc
gaggaaaccgccgaccagcaacgcgccatcgacgcggtgatcgccgacctggcacggccc
cgcgccatggatcgcgtggtctgcggtgatgtgggcttcggcaagacggaggttgccctt
cgcgccgccttcgccgcagctaccgccggcaagcaggtcgccgtgctggtgcccactacc
ctgctcgcccagcagcactaccgcaacttcgccgatcgcttcgccgactggcccgtgcgc
gtggaagtgctctcgcgcttcaagtcgaaaaaggaagtggacaacgcactggaacggctg
gccgacggccaggtggatgtcatggtcggcacgcacaagctgttgcaggcagacatccgc
ttcaagaacctcggcctggtcatcgtggatgaggaacagcgcttcggtgtacgccagaaa
gagcagctgaagaaactgcgcgccgaggtcgacctgctcaccctcaccgccacgcccatc
ccgcgtacgctgaacatggccatgagcggtctgcgcgatctctccatcatcgccactccg
ccggcccaccgcacggcggtgcgcacgctgatctccacctaccagcccgccatgatccgc
gaggccatccagcgcgagctgtcgcgtggcggccaggtgtatttcctgcacaacgaagtg
gagtccatcgagcgcattgcccgcgaactgggtgagctggtgcccgaagcacgcatccgc
gtcgcgcacgggcaaatgccggagcgtgagctggaacaggtcatggccgacttccaccgc
cagcgcttcaacgtgctggtgtccaccaccatcatcgaatccggcatcgatattcccacg
gcgaacaccatcatcgtgaaccgtgcagaccgtttcggccttgcccagctgcatcagctg
cgcggtcgcgtcggccgttcgcatcaccgtgcctacgcctatctcatcgtgccggatcgc
aaggcgatgacggccgacgccgagaagcgcctggaagcactggcttccctggaagaactg
ggcgccggcttcacccttgccacgcacgatctcgaaatccgtggtgcgggcgagatgctg
ggcgacgaacaatccggccagatccaggaaatcggtttcggcctctacaccgaactgctc
gaccgcgccgtgcgtgcgctcaagtcgggcaaggtgcctgacttcgacctcacgtcggaa
cacgagacggaggtggaactgcacctgccggcattgatccccgaggattacctgccggat
gtgcatacgcgcctgacgctgtacaagcgaatcgccagcgcgaaggacgacgaaggcctg
cgcgagcttcaggtcgagatgatcgatcgcttcggcctgctgcccgaccagaccaaatgc
ctgttcgccgtggcacagctgaagctcatggccacgccgctgggcatccgcaagctggac
ttcggcgcaaacggcggccgcgtcaccttccgcgacaagccggatatcgacccgatggcg
ctgatcaagctgatccagcagcagccgcgtgtgttcaagatggacgggcaggacaagctg
cgcgtgatcatggaccttcccggcagcagtgagcggatcagggcagcgcaggaaaccctc
gtctcactgggcgcccgccgcccgagctaa
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