Legionella antarctica: TUM19329_23660
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Entry
TUM19329_23660 CDS
T07713
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
lant
Legionella antarctica
Pathway
lant03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TUM19329_23660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lant03400
]
TUM19329_23660
Enzymes [BR:
lant01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
TUM19329_23660
DNA repair and recombination proteins [BR:
lant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
TUM19329_23660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
BCA96005
UniProt:
A0A6F8T5N9
LinkDB
All DBs
Position
complement(2468991..2471510)
Genome browser
AA seq
839 aa
AA seq
DB search
MTLKKYRQKRDFNKTSEPKGKITPQYHRLFVIQKHAARHLHYDFRIELDGVLKSWAIPKG
PCLDPAVKRLAIHVEDHPVEYGFFEGIIPKGEYGGGTVMLWDKGVWEPLDDNPRKAFKKG
HLRFEIDAEKLKGRWDLIRFKDEQHWFLIKHKDVHSHSLNDYNITEEQPNSVLTNQSIKE
ISEHYHKIWTAQGEKKIPAVKSKSSLKAPQLKGLDHLRTSPLPEFISPQLATLAIKPPKG
DDWLHEVKFDGYRIIAFVDRGSVALKSRNNKDWTSHFPKVVADIKKLKLNKAVFDGEIVL
LNKEGKSDFQLLQNAIKGNSDAPFIYYIFDLLYYDQYDLMSLPLIKRKDLLHTLLRNQST
TIRYSDFIQAQGSEVFEQACHMSLEGIISKEANAPYVTRQSKSWLKIKCTNRQEFVIGGY
TQSKGEHRSFGALLLGVYNSNRELVYSGKVGSGFSDASLKEIGSLLQKHAQSDNPFHTLP
PGARDASWVRPIFVAEVEFSEWTAEGYLRHPSFKGLRLDKKANTVKAELKKSLEKTVSSP
EFKSDHKIIKKASVFKISHPGKIMYPEDKITKEELLDYYDVVSPYILPYITNRPLTLLRC
LEGYQHCFYQRHHNKGTPEALKAIAIESKGIREKYIYLDDKKGLLSLVQMGVLEIHPWGS
QINALEYPDWITMDLDPAPDVEWKKVVAAALDIKQNLAQYKLTSFVKTSGGKGLHVVIPI
KPEYDWADIKNFTHVFVNFMEQLKPKNYISKMSKSKRAGKIFIDYLRNQRGATAIAVYST
RARIHAPVATPIAWDELSNNQKDTDFNLKNIFSRLDALKTDPWENFLKTNQLLPLDELE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgactttaaaaaaataccgtcaaaaaagagattttaataaaacctcggaacctaaagga
aaaattactcctcaataccaccgtttatttgtcatacaaaaacatgcggctcgtcattta
cactatgattttcgtatcgagttagatggtgttttaaaaagctgggcaattcccaaaggt
ccttgtctggatcctgcagttaaaagattagcgatacatgtggaggatcacccggttgaa
tatggattttttgaaggcattataccaaagggagaatatggtggaggtaccgtcatgctt
tgggataaaggagtttgggaaccgctggatgataatccacgtaaggcttttaaaaaaggt
catcttcgtttcgagatagatgctgagaagttaaagggacgttgggatttaattcgattt
aaagacgagcaacattggtttttaattaaacataaagatgttcatagccactcattgaat
gattataatatcactgaagagcagcctaatagcgtacttaccaaccaatctattaaggaa
atcagcgagcattatcataaaatatggactgcgcagggagaaaaaaaaatacctgcagtt
aaatccaaatccagccttaaagctcctcaactgaaaggattggaccatttaagaaccagc
cctttgcctgaattcatttccccgcaacttgctactttggcgattaaacctccaaaagga
gatgattggttgcatgaagtgaaatttgatggatatcggattatagcctttgtcgataga
ggcagtgttgctctgaaatcgcgcaataataaagattggacgagccattttccgaaggtt
gttgctgatataaaaaaacttaaattaaataaagctgtttttgatggtgaaatcgtatta
ttaaataaagagggtaaatcagattttcagttattgcaaaacgcaatcaaaggtaattct
gacgctccttttatctattatatttttgatctgctttattacgatcaatatgatttgatg
tctttgcctttaatcaaaagaaaagacttgttacatactttattgagaaatcaatctacc
actattcgttacagtgatttcattcaagctcagggatctgaggtttttgaacaggcctgt
catatgtcattggaggggattatttctaaagaagcaaatgctccatatgttaccaggcaa
agtaaaagttggttaaaaataaaatgcactaatcgacaagagtttgtaattggtggttat
acacagtccaagggggagcatcgttcttttggtgctttgttactgggtgtatataacagt
aaccgtgagttagtatactctggaaaggtaggatccgggtttagtgatgcctccttgaaa
gaaataggctctctgttacaaaaacacgctcaatctgacaatccatttcatacattacct
ccaggggctcgagatgcctcttgggtaagaccaatttttgtggcagaagttgaattcagc
gagtggacggcagaagggtatttgcgtcacccaagctttaaaggattacgtctggataaa
aaagcaaatacggttaaagcagaactgaaaaaatcattggaaaagaccgtttcttctcct
gaattcaaatctgatcataaaattatcaaaaaagcatcggtatttaaaataagtcatcct
ggtaaaattatgtaccctgaagacaaaattaccaaggaagagttactggattattatgat
gtagttagtccttacatattaccttatataacaaatcgacctttaactttgctgcgttgc
cttgaaggttaccaacattgtttttatcagcgccatcataataaagggactcctgaagcg
ctgaaggctattgctattgaaagcaaaggtatacgtgaaaaatacatctatttagatgat
aaaaaaggtctgttgagtctggtacaaatgggggtattagaaatccatccttggggtagc
cagattaatgcccttgagtatcctgattggataacgatggatttggatcctgcaccagat
gtggagtggaaaaaagttgtagctgctgcattagatatcaagcaaaatttagcacaatat
aaattaacgagctttgttaaaacgagcggtggaaaaggattacatgtggtaattccaatc
aagcctgaatacgattgggcggatataaaaaattttactcatgtttttgtgaattttatg
gagcaactaaagccgaaaaattacatcagcaaaatgtccaaatcaaaaagagcaggaaaa
atatttattgattatttacgaaatcaacggggcgccactgcgattgctgtctactctacc
agagcaagaatccacgctcctgtcgctacaccaattgcctgggatgaattaagtaacaat
caaaaagatactgattttaatctaaaaaatattttttcacgtctggatgccttaaaaaca
gatccttgggagaattttttaaagacaaatcaattattacctttagatgaactggaataa
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