Lentibacillus amyloliquefaciens: AOX59_05500
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Entry
AOX59_05500 CDS
T04204
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lao
Lentibacillus amyloliquefaciens
Brite
KEGG Orthology (KO) [BR:
lao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lao03019
]
AOX59_05500
03009 Ribosome biogenesis [BR:
lao03009
]
AOX59_05500
Enzymes [BR:
lao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AOX59_05500
Messenger RNA biogenesis [BR:
lao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOX59_05500
Ribosome biogenesis [BR:
lao03009
]
Prokaryotic type
rRNA helicases
AOX59_05500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
CMS1
Mis14
Motif
Other DBs
NCBI-ProteinID:
ALX48104
UniProt:
A0A0U4DRY5
LinkDB
All DBs
Position
complement(1097695..1099008)
Genome browser
AA seq
437 aa
AA seq
DB search
MSHQFNQFSFQPEIKTVIEQLNFQTPTPIQQKVIPSILKGTSVIGQSHTGSGKTHAYLLP
LFNQLDTNKREVKLVITAPTRELARQIYDEVRKVIDYAGMQGTWIAKLLVGGTDKQKMMD
KLKKPPHIIVGTPGRILDMVKEDAISIYSASSFVIDEADLMLDLGFIREVDQLLLRADEN
IQILAFSATIPQQLEQFYSKYLKNPLHVKINDQLAPEQLEHVIVPIRHREASDIIIDISK
TIHPYISIIFANGKDAADSLADSLLQKGLNVGIIHGGISPRERKRTLKDIQNLKFQYIVA
TDLASRGIDIKGVSHVINAQFPKEEDFYVHRAGRTARAGMEGTVISLYDEADYRLLEKLK
QKGLTFAFRDLKNGEWKEAKAWNERTKRRKTDSSTNSEAWKKVKKPKKVKPGYKKKMKNE
QEKIKKQMTSKSKKHRK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcaatttaatcagttttcttttcagcctgagataaaaactgttatcgaacaa
ttaaattttcaaaccccgacaccgattcaacaaaaagtcatcccgtctatcttgaaagga
accagcgtgattggacagtcgcacactggttcaggaaaaacgcacgcctatttactgccg
cttttcaatcagcttgatacaaataaacgggaagtcaaattggttatcacggcacctaca
cgggagcttgcaaggcaaatatatgatgaggtcagaaaagttattgactatgcaggaatg
caaggaacctggattgcgaagctgctagtcggaggaaccgataagcaaaaaatgatggat
aaattaaaaaaacctccgcatattattgttggaacaccaggacgaatactggacatggta
aaggaagatgcaatttcaatttatagcgcttcttcgtttgtgattgacgaagctgatctg
atgctggacttaggtttcattcgggaagttgaccaattgctattgcgggcagatgaaaac
attcaaatccttgctttttcggccactattccgcagcaactggagcaattttacagtaaa
tatcttaaaaacccgctccatgtgaaaattaatgatcaattagcacccgagcaactggag
catgtcatagttccgattcgccatcgtgaagcgtcagatataattatcgacatttcgaaa
actatccacccttatataagcatcatttttgcaaatgggaaggatgcagcggacagttta
gcggattcattactgcagaaaggtcttaatgttgggattattcatggcgggatttcacca
agagaacgaaaacgaacacttaaagacatccaaaatcttaagtttcaatatattgttgca
acagaccttgcttcacggggcatcgacattaaaggcgtcagccatgtcataaatgcacag
ttccctaaagaggaagacttctatgtgcatcgggccggccggactgcacgggccggaatg
gaaggcacagtcatcagtttatatgatgaggcggattaccggctgttggaaaaattaaaa
caaaaagggctgacgtttgcattccgtgatttaaagaatggggaatggaaagaagccaaa
gcctggaatgaacgaaccaagcgccgaaaaacagacagcagtacgaattctgaagcttgg
aaaaaggttaagaaaccaaaaaaagtaaagccgggctataagaagaaaatgaaaaatgag
caggaaaaaatcaaaaaacaaatgacgtccaagtcaaaaaagcatcgaaaataa
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