Lactobacillus apis: DKL56_00030
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Entry
DKL56_00030 CDS
T06844
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lapi
Lactobacillus apis
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lapi03032
]
DKL56_00030
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_00030
Enzymes [BR:
lapi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DKL56_00030
DNA replication proteins [BR:
lapi03032
]
Prokaryotic type
DNA Topoisomerases
DKL56_00030
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DKL56_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AWM73007
LinkDB
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Position
6669..9164
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AA seq
831 aa
AA seq
DB search
MDNDNQSQDHRIRNVDLTNVMNSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELG
VTPDKPFKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDE
PAAMRYTEARMSKIAVEMLRDINKNTIDWQRNYDDEENEPVVLPARIPNLLVNGTSGIAV
GMTTNIPPHNLAEVIQGIHMLMDNPDVSTKELMKAIPGPDFPTGGTIMGRGGIYRAYESG
RGNIVVRANTTIETEKSGRERIVVTEIPYLVNKAELVKKIADLARSKTIDGITGVRDESD
QSGMRITIDVRRDASASVILNNLFKLTQMQANFGMNMVAIVDGAPHFLSLKEMLQYYLKH
QEDVVTRRTKFDLAKAEARAHILEGLKIALDHIDEIVHIIRQSESSDIAKAALISRFGLD
DKQSQAILDMRLVRLTGLERDKVEAEYNELKVKIDDYKDILAKPERINEIIYEELLDIEK
RFGDERRTKIGEGEVISIEDEDLIEKQDVLLTLTHSGYIKRMLINEFKTQNRGGKGIKGM
GIKDGDFIEKLIYSSTHDMLLFFTNKGKVYSKKAYEIPEFGRTAKGLPVVNLLQLEKGEK
IQTIINVAEDANDQYLFFITKMGTVKRTSVSEFANIRNSGLIALTLRDGDELSNVLTTDG
KQDVLIGTHLGYAVRFNESAVRSMGRTAAGVRGINLRENDYVVGSGVVKDSDEVLVISEK
GYGKRTSASEYPTKGRGGKGIKTANVTEKNGPLSGVTVIDGTQDIMVITDDGIMIRFKVD
NVSQTGRSTIGVRLIKVGDNSKVASLAVVPAEADQEVGDAEETETPTEENN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacaatcaaagtcaagatcacagaattagaaatgtcgatttgaccaatgtg
atgaacagttcgtttttggactatgcgatgtcagttattgtggctcgggccttgcctgat
gtgcgcgatggcttgaagccggttcaacgtcgtattctttatggaatgagcgaactgggc
gttacaccagataaaccatttaagaaatctgccagaattgttggagaagttatgggtaag
ttccacccacacggagattcctcaatttacttggctatggcacatatggctcaggacttc
agttatcggtacatgttggttgatggccacggtaactttggttctgtcgacggtgatgaa
ccagccgcaatgcgttataccgaggcgcggatgagtaaaattgccgttgaaatgttgcgc
gatatcaacaaaaatacgattgattggcaacgtaactatgatgatgaagaaaacgagccg
gttgttttaccagccagaattcctaatcttttagttaacggaaccagtggaattgctgtc
ggaatgacaaccaacattccaccacataatcttgcagaagttattcaaggcattcatatg
ctgatggataatccagatgtttcaactaaagaactgatgaaggcaattccaggtccagat
ttcccaactggtggtaccattatgggccgtggtggaatttaccgggcctatgaatcagga
cgaggcaacattgttgttagagcaaatacaacaattgaaactgaaaaaagtggtcgtgaa
cgaattgttgtaaccgaaattccttacttggtaaataaggctgaattggttaagaaaatt
gctgatctagctcgttctaagacaatagatgggattaccggtgttcgtgatgaatccgac
cagtctgggatgagaatcacaatcgacgttcgtcgtgatgctagtgcaagtgttatcttg
aacaatttatttaagctaactcaaatgcaggctaactttggaatgaacatggttgcaatc
gttgatggtgcgccacatttccttagtcttaaagagatgctgcaatactacttgaagcat
caagaagacgtcgttacacgcagaactaagtttgacttagctaaggctgaggcaagagca
cacattctagaaggtttgaagattgctcttgaccatattgatgaaattgttcatattatt
cgtcaaagtgaatcaagtgatattgctaaggctgccttaattagtcgtttcggcttagac
gacaagcagtcacaagctattttggacatgcgtctggttcgtttgactggattagaacgt
gacaaagttgaagctgaatacaacgaattaaaggttaagattgacgattacaaggatatc
ttagctaagccagagcgaattaacgaaatcatctatgaagaactgcttgatattgaaaag
cggtttggtgatgagcgtcggaccaagattggtgaaggtgaagtcatttcaattgaagat
gaagatctaattgaaaaacaagacgttttattaactttgacacacagcggctacatcaaa
cggatgttaattaacgaatttaagacacaaaaccgtggtggtaaaggcatcaaaggaatg
ggtattaaggacggcgactttattgaaaagttgatttactcaagtacccacgatatgctc
ctattctttactaacaagggaaaagtctactcgaagaaagcctacgaaattccagaattt
ggtcgaacagcgaaggggttgccagtagttaacttacttcagcttgaaaaaggtgagaag
atccagaccattatcaatgttgcagaagatgctaatgatcaatatctcttcttcattacc
aagatgggaacagtaaagcgcactagtgttagtgaatttgctaatattaggaatagcggt
ttaattgcgttaactttgcgtgatggggatgaattgagcaatgttttgacaactgatggc
aaacaagatgtcttgattggaacccatctaggctatgctgttcgcttcaacgagtcagcg
gttcgttcaatgggccgaactgctgctggtgtacgcggaattaacttacgtgaaaatgat
tatgttgttggttctggtgttgttaaggatagcgatgaagttcttgttatttctgaaaaa
ggttatggtaaacgcacctcagctagtgaatatccaactaaaggacgtggcggtaaagga
attaagaccgctaatgttacagaaaagaatggaccactttctggtgtaactgtaatcgat
ggaacacaggacattatggtcattacggacgatggaattatgattcgtttcaaggttgat
aatgtttctcaaactggccgtagcacaattggtgttcgcttgattaaagttggcgacaac
agtaaagtagctagtcttgctgttgttccagccgaagcagatcaagaagttggcgatgca
gaagaaactgagacaccaactgaagaaaataattaa
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