Lysobacter antibioticus ATCC 29479: GLA29479_139
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Entry
GLA29479_139 CDS
T04526
Name
(GenBank) outer membrane autotransporter barrel domain protein
KO
K20276
large repetitive protein
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GLA29479_139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
SprB
Cadherin_5
Cadherin_4
NtrZ
Motif
Other DBs
NCBI-ProteinID:
ALN61027
LinkDB
All DBs
Position
143136..149693
Genome browser
AA seq
2185 aa
AA seq
DB search
MAVAAPSPHCGPFNISVVNGGTQIINASACDGPDNGGIGGIVTHPAHGTATSDQFGQTVT
YVHNGNTATSDTFVFGDGLGNDVTVNVTIGAPTSPIIVSPASISPVLGVPFSQALSATGG
VGPYSFVHTSGTLPTGLTFSGGAFGGTPTQRGNFAVNITVTDSTTPTPLTTVKSYAIVIP
IVAPVISPTTLPAMAVGIPYNTTLSSSGGVAPYIYSVQAAPDLLPPGLSLSSGGVISGTP
TTTGTYTFRILSEDSSGSQDGSDNIGNRLYTVTVTAAPTIVVDPATIPGATVGAAYSQTF
TASGGTSPYTFAISAGALPAGLTLASGGGLTGTPTAAGTFNFTVRATDANTFTGTRAYTL
TVAAPTTSIAPTTLLNGTVAAAYSQSITASGGIAPYTYAITAGALPAGLSLSSAGLLSGT
PTAGGSFNFTVTATGSSTGTGAPHTGSRAYTLVIAAPTINLPATTLANGTVAVAYGATLN
AASGGTAPYTYALSAGALPPGISLSSAGVLSGTPTAAGTFNFAVIATDSSTGTGAYSSAP
RGYSLQIINIPPVANAVSASVAYNSGANPITLNITGGVPTSVAVGTAPLHGTAIASGTSI
TYQPTAGYAGPDSFTYTASNGAGTSAPATVTITVSPPTITVTASSPLTAQIGVVYTQTFT
WSGGTQPFSGYNVTGLPAGLSIIGTTGNSVTVSGTATAAGTFPLNASAIDSSTGDGPFTV
GQAFVLSVSAPTLSMTPAAGTLSATYGSVYSETFVASGGTLTYAYSVSAGALPAGLSLDG
GTGVLSGTPTVTGLFTFSVRAVDSSTGSGAPFSRTQNYVLQVAAPTIVIAPATVPGAQIG
ASYNEALSASGGIGPYSFAVTAGALPAGVSLSSTGTIAGTPTAGGTFNFTVTASDANAQT
GSRAFALTVAAATISVAPTTLPAGGVAQVYSQTLTASGGTPGYTFAITTGALPAGLSLAS
NGTLSGTPTAGGSFNFTATATDSSSGSGPYTGSRAYTLSIGASTVVLPPTSFAGPTVASP
YSANINAATGGTAPYSYAVVSGSLPPGMSFSSAGLISGTPTAPGTFNFSATATDSSTGTG
PYTSAPQSYSLTVADIAPVANPVSATVAYGSGANPITLNITGGIPALVAIAAAPAHGTAI
ASGTTITYQPAAGYAGSDSFTYTASNVAGTSAPATVTITVTNPVITVTAGGPLTTQVGAA
YSQTFTWAGGTSPYSGYNVAGLPAGLSITGTTADSVTVSGTPTAAGSFSLNASATDSSTG
NGPFTQGQAFTLTVGAPTLAMTPAPGNLPMNYGVATTINFAASGGSAPYSFSLASGSLPV
GVSFSSAGVLSGTPTVPGNYNVAVRVQDSSTGTGAPFALQQNYTIVVAVPSIVLDPPTLP
NGTAGTAYNATITATGGVAPYNFSLLSGALPVGMTFSSAGALSGVPRSDGNFSLTVQGTD
SNGQTGSRVYTFTIAPATVVISPATLPGGVVGVPYNQSLSSSGGIAPYSYSIASGNLPVG
LSFSSAGVYSGTPTTAGSYTANIRSTDDAGYNTTVPLTIVIVDAVPVAVDDSATTMSNQA
VTIPVTANDTGIIASVAVASAPSHGTAVVSGLDVVYTPTSNYFGSDSFTYTASGPGGTSA
PATVTITVNALPVPQGQPQTATILSTQTATIDAAAGATGSPFTGVTLLSPPSSGTAVVSG
TQIVYTPAANTVGPIALVYTLNNAFGPSAPITSTITVNAVPVAQSRRVRTIAGAAITVDL
TAGATGGPFTAANLVSLTPASSGSAAISGSGGVYTLRYTSVIGFSGVAVASFTLNNAHAT
SAVATIEIEVAPRSDPSKDAEVLGVLNAQASATRRFANSQIGNFQQRMQGMHEGGSDGAR
FDNGLSFSIDQRCRDEARRTPGSDCRQPLLGDEQAAIEPKPPVEGSGTRYGIWTGGSINT
GNRDGRGGGSAGFDFETSGISAGADYRLRDDFALGGGIGYGRDDTDVGQRGSRSKAKSYS
AVLYASYHPGESFYLDGLLGYQWLSFDTRRYVTDTGGMVRGDRDGTQWFASVSAGMDYRR
DRLHVSPYARLDVARARLDGYTEQGDASYSLTYRDMDVDTTTTSLGVRLDYRYPVRLGTF
SPMVLLEYQHDFQDESFATMSYADMVGGPFFRARLEGLDRNRFVFGIGAVLQTERDLVLR
FEYRGLFGSGNDDDNSFMINIEKKY
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgccgcgccgtcgccgcattgcgggccgttcaatatctccgtggttaatggc
ggcacgcagatcatcaatgccagcgcctgcgacggcccggacaacggcggcatcggcggc
atcgtgacccacccggcacacggcaccgcgacgagcgatcagttcggccagacggtgacc
tacgtgcataacggcaacacggcgaccagcgacaccttcgtgttcggcgacggcctcggc
aacgatgtcaccgtcaacgtcaccatcggcgcgccgacctcgccgatcatcgtcagcccg
gcctcgatctcgccggtcctgggcgtgcccttcagtcaggcgctgagcgccaccggcggt
gtcgggccctatagcttcgtgcataccagcggcaccttgccgactggcctgaccttctcc
ggcggcgccttcggcggcaccccgacccagcgcggcaacttcgcggtcaacatcaccgtg
accgattcgaccacgccgacgccgctgactacggtcaagtcttatgcgatcgtcattccc
atcgtggcgccggtgatctcgccgacgaccctgccggcgatggcggtcggcattccctac
aacacgactttgagcagcagcggcggcgttgcgccgtacatctattcggtgcaggccgcg
ccggacctgttgccgccgggcctgagcctgagcagcggcggcgtgatcagcggcaccccg
accaccaccggcacctacaccttccgcattctgtccgaggacagcagcggctcgcaggac
ggctccgacaatatcggcaaccggctctataccgttaccgtcacggcggcgccgaccatc
gtggtcgacccggccacgattccgggcgccaccgtcggcgccgcctatagccaaacgttc
accgccagcggcggcacctcgccgtacaccttcgcgatctcggcgggcgccttgccggcc
ggcctgacgctcgcgagcggcggcggcctgaccggcacgccgaccgcggcgggcaccttc
aacttcaccgtgcgcgccaccgatgccaacactttcaccggcactcgtgcctacaccctg
accgttgccgcgccgacgacctcgatcgcacctacgaccctgctgaacggcaccgtcgcg
gcggcctatagccagtccattaccgcgagcggtggtatcgcgccgtatacctatgcgatc
accgccggcgcgttgccggcgggcttgagcctgagcagcgcgggcctgttgagcggcact
ccgaccgcgggcggcagcttcaatttcaccgtcaccgcgaccggcagcagcaccggcacc
ggcgctccgcataccggttcgcgcgcctacaccctggtcatcgccgcgccgacgatcaac
ctgccggcgaccactctggccaacggcacggtcgccgtggcctatggcgccaccctcaac
gccgccagtggcggtaccgcgccgtacacttatgcgctgagtgccggcgcgctgccgccc
ggcatcagcctgagcagcgccggcgtgttgtcgggcacgcccaccgcggccggcaccttc
aacttcgccgtgatcgcgaccgacagcagtaccggcaccggcgcgtacagttcggcgccg
cgcggctattcgctgcagatcatcaacatcccgccggtcgccaatgcggtctcggccagc
gtcgcctacaacagcggcgccaacccgatcaccttgaacatcaccggcggcgtgccgacc
tcggtggccgtcggtacggcgccgctgcacggcaccgcgatcgccagcggcacctcgatt
acctaccagccgacggcgggttatgccggtccggacagcttcacctacaccgcgagcaac
ggcgccggcacttcggcaccggcgacggtcaccatcacggtgagcccgccgacgatcacc
gtgaccgcctccagcccgctgaccgcgcagatcggcgtggtgtatacgcagaccttcacc
tggtccggcggcacccagccgttcagcggttacaacgtgaccggcctgcctgccggtttg
agcatcatcggcaccaccggcaacagcgtgaccgtcagcggcacggcgaccgcggccggt
actttcccgctcaacgccagcgcaatcgacagcagcactggcgacggtccgttcaccgtc
ggccaggccttcgtcctgtcggtgagtgcgccgacgctgagcatgaccccggccgcaggc
accttgtccgcgacctatggcagcgtctatagcgagaccttcgtcgccagcggcggcacc
ctgacttacgcctacagcgtatcggcaggcgctttgccggccggcctgagcctggacggc
ggcaccggcgtgttgtcgggtaccccgaccgtgaccggtttgttcaccttctcggtccgc
gccgtcgacagttccaccggttccggtgcgccgttctcgcgcacccagaactacgtgctg
caggtcgctgccccgaccatcgtgatcgcaccggccaccgtgccgggcgcgcagatcggt
gcgagctacaacgaagcgttgagcgcgagtggcggcatcggcccgtatagcttcgcggtg
accgccggcgctttgccggccggcgtgagcctgagctcgaccggaaccatcgccggtacg
ccgactgcgggcggtaccttcaacttcaccgtcactgcgagcgacgccaacgcccagacc
ggttcgcgcgcctttgcgctgaccgtcgcggcggcgaccatcagcgttgcgccgacgacg
ctgccggcaggcggtgtggcccaggtctacagccagaccttgaccgcgtccggcggcacg
cccggttacaccttcgcgatcaccaccggcgccttgccggccggcctgagcctggccagc
aacggcacgctcagcggcaccccgaccgcgggcggcagcttcaacttcaccgccaccgcg
accgacagcagcagcggcagcggcccatacacaggttcgcgcgcctacaccctgagcatc
ggcgcctcgaccgtggtgttgccgccgacctcgttcgccggcccgaccgtcgcatcgccc
tacagcgccaacatcaatgcggccaccggcggcactgcgccctacagctatgccgtggtc
tccggctcgctgccgcccggcatgagcttcagcagcgccggcctgatcagcggcacgccg
acggcaccgggcacgttcaacttcagcgcgaccgcaaccgacagcagcaccggcaccggt
ccctacacctcggcgccgcagagttattcgttgacggtcgccgacatagcgccggtcgct
aatccggtctcggccacagtggcctacggcagcggcgccaacccgattacgctcaacatc
accggcggcatcccggctttggtcgcgatcgcggcggcacctgcgcacggcacggccatc
gccagcggcaccacgatcacctaccagccggccgcgggctacgccggcagcgacagcttc
acctacaccgcgagcaacgtcgccggcacttcggcgccggccacggtcaccatcaccgtc
accaacccggtgatcacggtgaccgcgggcggcccgctgaccacgcaggtcggcgccgct
tatagccagaccttcacctgggccggcggcacttcgccgtatagcggttataacgtcgcc
ggtttgccggcgggcctgagcatcaccggcacgaccgccgacagcgtcaccgtcagcggc
acgccgactgcggcgggcagcttcagcctcaacgccagcgcaaccgacagcagcaccggc
aacggcccgttcacccagggccaggccttcaccctgacggtcggcgcgccgaccctggcg
atgaccccggcgccgggcaacctgccgatgaactacggcgtcgccaccaccatcaacttc
gccgcgagcggcggctcggcgccgtacagcttcagcctcgccagcggttcgctgccggtg
ggcgtgagcttcagttcggccggcgtgctcagcggcacgccgacggtgcccggcaactac
aacgtggccgtgcgcgtgcaggacagcagcaccggcaccggtgcgccgttcgccctgcag
cagaattacaccattgtggtcgccgtcccgagcatcgtcctggatccgccgacgctgccc
aacggcaccgcgggcaccgcctacaacgccaccatcaccgccaccggcggcgtcgcgccg
tacaacttctcgctgctcagcggcgcgttgccggtcggcatgacgttctcctcggccggc
gcgctcagcggcgtgccgcgctcggacggcaatttcagcctgaccgtgcagggcaccgac
agcaacggccagaccggttccagggtgtacaccttcaccatcgccccggccaccgtggtg
atttcgccggcaaccttgcccggcggcgtggtcggtgtgccctataaccagagcctgagc
agcagcggcggcatcgcgccgtacagctactcgatcgcctcgggcaacctgccggtcggc
ctgtccttcagttccgccggcgtctacagcggcaccccgaccacggccggcagctacacc
gccaacatccgttccaccgacgacgccggttacaacaccacggtgccgctgacgatcgtg
atcgtcgacgcggtgccggtcgcggtcgacgacagcgccaccacgatgtcgaaccaggcg
gtgacgatcccggtcaccgccaacgacaccggcatcatcgccagtgtcgcggtcgcctcg
gcgccgagccacggcaccgcggtggtcagcggcctggatgtggtctacacgccgaccagc
aactacttcggcagcgacagcttcacctacaccgccagcggcccaggcggcacctcggcg
ccggccacggtgacgatcaccgtcaacgcgttgccggtgccgcaaggccagccgcagact
gcgacgatcctgtcgacgcagaccgcgaccatcgatgcggccgccggcgccaccggcagc
ccgttcaccggtgtgaccctgttgagcccgccgtcgtcgggcacggcggtggtcagcggc
acccagatcgtttacaccccggcggccaacaccgtcggcccgatcgccctggtctacacg
ctcaacaacgccttcggcccgtccgcgccgattacctcgaccatcaccgtcaacgcggtg
ccggtcgcgcaatcgcgtcgcgtccgcaccatcgccggtgccgcgatcacggtcgatctg
accgccggcgccaccggcggtccgttcaccgcggcgaatctggtgtcgttgaccccggcg
tcgtccggcagcgcggcgatcagcggttccggcggtgtgtacaccttgcgctatacgtcg
gtgatcggtttctccggcgtcgcggtggcgagcttcactctcaacaacgcccatgcgacc
tcggcggtggcgaccatcgaaatcgaagtcgcgccgcgcagcgatccgtcgaaggacgcc
gaagtgctcggcgtgctcaacgctcaggcttcggccacgcgtcgtttcgccaactcgcag
atcggcaacttccagcagcgcatgcagggcatgcacgagggcggcagcgacggcgcacgc
ttcgacaacggcctgagcttctcgatcgaccaacgctgccgcgacgaagcgcggcgcacg
ccgggcagcgattgccgccagcccctgctcggcgacgagcaggccgcgatcgagcccaag
ccgccggtcgaaggcagcggtacccgctacggcatctggaccggcggttcgatcaacacc
ggcaaccgcgacggacgcggcggcggttccgccggcttcgacttcgagaccagcggcatc
agcgccggcgccgactaccgcctgcgcgacgatttcgcgctcggcggcggcatcggctac
ggtcgcgacgacaccgacgtcggtcagcgcggcagccgcagcaaagccaagagctacagt
gcggtgttgtacgccagctaccacccgggcgagagcttctatctcgacggcctgctcggc
taccagtggctgtcgttcgatacccgccgctacgtcaccgacaccggcggcatggtccgc
ggcgaccgcgacggcacccagtggttcgcctcggtctcggccggcatggactaccggcgc
gatcgcctgcacgtctcgccgtatgcccgtctcgacgtcgctcgcgcccgcctggacggc
tataccgaacagggcgatgcgtcgtactcgttgacctatcgggacatggacgtcgatacc
accacgaccagcctgggcgtgcgtctggactatcgttatccggtgcgcctgggtacgttc
tcgccgatggtcctgctggagtatcagcacgacttccaggacgagagcttcgcgacgatg
agctatgccgacatggtcggtggtccgttcttccgcgcccgcctcgaaggcctggaccgc
aaccgcttcgtgttcggcatcggcgcggtcctgcagaccgagcgcgacctggtcctgcgc
ttcgaataccgcggcctgttcggcagcggcaacgacgacgacaacagcttcatgatcaac
atcgagaagaagtactga
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