Lysobacter antibioticus ATCC 29479: GLA29479_3136
Help
Entry
GLA29479_3136 CDS
T04526
Name
(GenBank) conserved repeat domain protein
Organism
laq
Lysobacter antibioticus ATCC 29479
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA_2
DUF11
OmpA
GramPos_pilinBB
bMG10
Motif
Other DBs
NCBI-ProteinID:
ALN63998
LinkDB
All DBs
Position
3433877..3439144
Genome browser
AA seq
1755 aa
AA seq
DB search
MIAKFQALATAFSRRMIMPVAFAASLLLTADPVHAQQAVNTASVTPPSGVTDPTCNVANP
PCNSATDSDSILASLTLVKTVTNDNGGTAVATAWTLQAAGPTPISGVTGATAVTNAPVSP
GSYTLSETGGPSGYTAGTYSCVVNGGAPVVSNSLTLAFGDTATCTINNDDQAATLTLVKT
VTNDNGGTATISDFPLTATGPTTITGVSGTATVTNAPVSAGVYTLTEAAVAGYTAGAWSC
TAGTLSGNSLTLANGVSATCTIVNDDQAATLTLVKTVTNDNGGTATISDFPLTATGPTTI
TGVSGTATVTNAPVSAGVYTLTEAAVAGYTAGSWSCTAGTLSGNSLTLANGVSATCTIVN
DDQAATLTLVKTVTNDSGGTATISDFPLTATGPTTITGISGDAAVTSAPVSAGVYTLTEA
SVAGYTAGAWSCTAGTLSGNSLTLANGVSATCTIVNDDIPPTQTIAKTMTNADNDGSGTV
SLGDVLTYTVTVTNTSTTTNLNNVVVSDSKITPTGGTTPCASVVPGGTCTLIGTYTVTAA
DVTAGSISNTATSTSAICPAGSTDPACTTTVNTPVTPLSQTLAKAMTGNADEDGSGTVSL
GDTLTYTVTVTNTSASGNLTNVVVSDSKITPSTITCATVAPTATCVLTGTYVVTAADVTA
GSISNTATSTSPACPAGSTDPACTTTVNTPVTPLSQTLAKAMTGNADEDGSGTVSLGDTL
TYTVTVTNTSASGNLTNVVVNDSKITPSSTTCASVAPGATCALVGTYTVTAADVSASSIS
NTATSTSTVCPAGSTDPACTTTINTPVVPSTVSYTKSASTAGPVVVGDVITYTLTTTVAN
AQTIGVLTLTDTLGAGLDFVAVTGQSPASAYSCNAANPLVCTLPAGTVPGVYTVTYTARV
NAQATGNVTNAVVGTGTDNPTCTGTCTTDTPVTASAVSYEKTASTAGPVVVGDVITYTLT
ATVTNAQTTGVTTLTDTMGSGLDFVAVTSAGAFTCNAANPLVCSLPAGTVPGSYAVTYTA
RVNGQAGGSVNNAVVGTGTDAPSCSNAGCSVTTEVAPPVVSYAKSASTAGPVAQGDTITY
TLTTTVANAPTRNALTLTDTLGTGLDFTAVTGAAGYSCNAANPLVCTLPAGTVPGTYTVT
YTAKVNAQASETVNNTVVGTGTDNPACVGICATSTTVAPPPTLRVIKQASPRDVKIGDLV
RYTVTVENTGTVDAIDATLVDTPPAGFTFVDGSLSVADRDGVGRLVGTYPIQVDQVDIAA
GERATFTYLLRVGAGVRAGIHSNSALMRDNGKIVSNVATAEVQLIADPLLDHALILGTVF
DDRDGDGWQDSAAIDDARVQGGFAADAYVPNSTTVDRGTGPKAEPDASSPMLHGIVLGGI
SARQSDADPVDAHRVVISQRLKELSFTDDFALTTKQGVTVRMDAAGTTRIERSGDAAKNL
SGAAPTVERRVSPTEGGYVVDYIVRNTGVDERGIPGVRIASIEGLLMETDQYGRYHLEGV
DVGTLERGRNFILKVDPSTLPPGSVFTTDNPLTRRVTPGLPVRFDWGVKLPAGLIEGGEE
QIEMELGEVFFAPGSAEVRAQYLPAIEKMAAQIKQHRGGEVVISANGDGESLAFDRASAV
KAELVKQLPADVLQALKVSVRGNADDPGSLIVGLGEGGALLGTVLFDTNKETIRPEFEPL
LDKVAAALERMHGGVIAIVGHTDVRASYQYNTALGMRRAKAVYDALAQRLSPEVRAKVRV
ESSNDPTAPVDVKRN
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgccaaattccaagccctcgcgacagccttcagccgtcgcatgatcatgccggtc
gcattcgcggcctccctcttgctgaccgcggatccggtgcacgctcagcaggccgtcaac
accgcgagcgtgacgcctccttccggggtcaccgaccccacctgtaacgtcgccaatccc
ccgtgtaacagcgcgaccgacagcgactcgatcctggcctccctgaccctggtcaagacg
gtcaccaacgacaacggcggcaccgcggttgcgacggcctggacgctgcaggcggcgggc
ccgacccccatcagcggtgtcactggcgccaccgcggtcaccaatgctccggtcagcccg
ggcagctacaccctctctgaaacgggcggcccgagcggatacaccgccggcacctatagc
tgcgtcgtcaacggcggcgccccggtcgtttccaacagcctgacgctcgccttcggcgat
accgccacttgcaccatcaacaacgacgaccaggccgcgaccctgactctggtcaagacg
gtgaccaacgacaacggcggtaccgcgacgatcagcgacttcccgctgaccgcgaccggc
ccgaccacgatcaccggcgtgagcggcacggcgacggtgaccaatgcaccggtcagcgcc
ggcgtctacaccctgacggaagcagccgtggccggttataccgccggcgcctggagctgc
acggcgggcaccttgtcgggcaacagcctgaccttggcgaacggcgtgagtgcgacttgt
acgatcgtcaacgacgaccaggcggcgaccctgaccctggtcaagacggtgaccaacgac
aacggcggtaccgcgacgatcagcgacttcccgctgaccgcgaccggcccgaccacgatc
accggcgtgagcggcacggcgacggtgaccaatgcaccggtcagcgccggcgtctacacc
ctgacggaagcagccgtggccggttacaccgccggtagctggagctgcaccgcgggcacc
ttgtcgggcaacagcctgaccttggcgaacggcgtgagtgcgacttgtacgatcgtcaac
gacgaccaggcggcgacgctgaccctggtcaagacggtgaccaacgatagcggcggcacc
gcgacgatcagcgatttcccgctgaccgcgaccggcccgaccacgatcacgggcatcagc
ggtgatgcagcagtgaccagtgcaccggtcagcgccggcgtctacacgctgacggaagcg
tcggtggccggctacaccgccggtgcctggagctgcaccgcgggcaccttgtcgggcaac
agcctgaccctggccaacggtgtttccgcgacttgcacgatcgtcaacgacgacattccg
ccgacccagacgatcgccaagaccatgaccaatgccgataacgacggcagcggcacggtg
tccttgggcgacgtgctgacctacacggtgacggtgaccaataccagtacgaccacgaat
ctcaataacgtggtggtgagcgacagcaagatcacgccgacgggcggcacgacgccgtgt
gccagcgttgttccgggcggtacctgcaccttgatcggcacctacacggtgaccgcggcc
gacgtgaccgccggttcgatcagcaacaccgccacttcgaccagtgcgatctgcccggcg
ggcagcaccgatcctgcgtgcaccacgacggtgaacacgccggtgacgccgctgagccag
accctggcgaaggcgatgacgggcaatgccgacgaagacggttcgggcacggtgtcgctg
ggcgacacgctgacctacacggtcaccgtgaccaacaccagcgcgagcggcaacctgacc
aacgtggtggtgagcgacagcaagatcaccccgagcacgatcacctgcgccacggtggcg
ccgacggcgacctgcgtgctgacgggcacctacgtggtgaccgcggccgatgtgaccgcc
ggttcgatcagcaacaccgcgacgtcgaccagcccggcctgcccggcgggcagcaccgat
cctgcgtgcaccacgacggtgaacacgccggtgacgccgctgagccagaccctggcgaag
gcgatgacgggcaatgccgacgaagacggttcgggcacggtgtcgctgggcgacacgctg
acctacacggtgacggtgaccaacaccagcgcgagcggcaacctgaccaacgtggtggtg
aacgacagcaagatcaccccgagcagtacgacctgtgcatcggtcgcgccgggcgccacc
tgcgccctggtcggcacttatacggtgaccgcggccgacgtgtctgccagttcgatcagc
aacaccgcaacctcgaccagcaccgtctgtcctgcgggcagcaccgatccggcctgcacc
acgaccattaacaccccggtggttccgtcgacggtcagctacaccaagtccgccagcacg
gccggtccggtggtggtcggcgacgtgattacctacaccctgacgacgacggtggctaac
gcgcagaccatcggtgtgctgaccctgaccgacacgctgggcgctggcctggacttcgtg
gcggtgaccggtcagagcccggcgagcgcctatagctgcaacgcggccaatccgctggtg
tgcacgctgccggccggtacggtgccgggcgtctacaccgtgacctacacggcgcgtgtg
aacgcccaggcgaccggtaacgtgaccaatgcggtggtcggcacgggcacggataacccg
acctgcaccggcacctgcaccaccgatacgccggtgacggcgtcggcggtcagctacgag
aagacggcgagcacggccggtccggtcgtggtcggcgacgtgatcacctacaccttgacg
gcgacggtgaccaacgcgcagaccacgggcgtgaccacgctgaccgacacgatggggtcc
ggtctggacttcgtcgcggtgaccagcgcgggtgcgttcacctgcaatgcggccaatccg
ctggtgtgcagcttgccggccggtacggtgccgggcagctacgcggtgacctacaccgcg
cgggtcaacggccaggccggtggcagcgtcaacaatgcggtggtcggcaccggtacggac
gctccgagctgcagcaatgcgggctgctcggtcacgaccgaagtcgcgccgccggtggtc
agctacgcgaagtcggccagtacggccggcccggtggcgcaaggcgacacgatcacctac
acgctgacgacgacggtggccaatgcgccgacgcgcaatgccctgaccctgaccgatacc
ctgggcacgggtctggacttcaccgcggtgaccggtgcggccggctatagctgcaatgcg
gccaacccgctggtgtgcacgctgccggccggtacggtgccgggcacctatacggtcact
tacacggccaaggtcaacgcgcaggcgtcggagacggtgaacaacaccgtggtcggcacc
ggtacggacaacccggcatgcgtgggcatctgcgccaccagcaccacggtggcgccgccg
ccgaccctgcgggtgatcaagcaggcctcgccgcgcgacgtgaagatcggtgacctggtc
cgctacacggtcacggtcgagaacaccggtaccgtcgatgcgatcgatgcgaccctggtc
gatacgccgcctgcgggcttcaccttcgtcgacggttcgctgtcggtggccgatcgcgac
ggcgtcggtcgcctggtcggtacctatccgatccaggtcgaccaggtcgacatcgccgcc
ggtgagcgcgcgacgttcacctacctgctgcgggtcggcgccggcgtgcgcgcgggcatc
cactccaacagcgcgctgatgcgcgacaacggcaagatcgtctccaacgtggccaccgcc
gaagtgcagctgatcgccgatccgttgctcgaccacgccctgatcctgggcacggtgttc
gacgaccgcgacggcgacggttggcaggacagcgcggcgatcgacgacgcgcgggtccag
ggcggcttcgctgccgacgcttacgtgccgaactcgactacggtcgatcgcggcaccggt
ccgaaggcggaaccggacgcgagctcgccgatgctgcacggcatcgtgttgggcggcatc
tcggcccgtcagtccgacgccgatccggtcgacgcgcaccgcgtggtgatcagccagcgc
ctgaaggagttgagcttcaccgacgacttcgcgctgaccaccaagcagggcgtgacggtg
cggatggatgcggccggtaccacccggatcgagcgcagcggcgacgcggccaagaacctc
agtggcgcggccccgacggtggaacgtcgggtcagcccgaccgaaggcggctacgtggtc
gactacatcgtccgcaacaccggtgtcgacgaacgcggtatcccgggcgtgcgtatcgcc
tcgatcgagggtttgttgatggagaccgaccagtacggccgctatcacctcgagggcgtg
gacgtgggcaccctggaacgcggccgcaatttcatcctcaaggtcgatccgtcgaccctg
ccgccgggcagcgtgttcaccaccgacaacccgctgacgcgccgcgtcaccccgggcctg
ccggtccgcttcgactggggcgtcaagctgccggccgggctgatcgaaggcggtgaggag
cagatcgagatggaactgggcgaagtgttcttcgccccgggcagcgccgaggtgcgtgcg
cagtacctgccggcgatcgagaagatggccgcgcagatcaagcaacaccgcggcggcgaa
gtggtgatcagcgccaacggcgatggcgagtcgctggcgttcgatcgggcttcggcggtc
aaggccgagttggtcaagcaattgccggccgacgtgctgcaggcgctgaaggtcagcgtg
cgcggcaacgccgacgacccgggttcgctgatcgtcggcctgggcgaaggcggtgcgctg
ctgggcacggtgttgttcgacaccaacaaggagaccatccgtccggagttcgagccgctg
ctggataaggtcgcggctgcgctggagcgcatgcacggcggcgtcatcgcgatcgtcggc
cacaccgacgtgcgcgcttcgtaccaatacaacactgcgctcggcatgcgacgcgccaag
gccgtctacgacgcgttggcccaacgactgagccccgaagtgcgcgccaaggtgcgagtc
gagtcgagtaacgatccgaccgcccctgtcgacgtgaagcggaattga
DBGET
integrated database retrieval system
