Lysobacter antibioticus ATCC 29479: GLA29479_586
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Entry
GLA29479_586 CDS
T04526
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq00521
Streptomycin biosynthesis
laq00523
Polyketide sugar unit biosynthesis
laq00541
O-Antigen nucleotide sugar biosynthesis
laq01100
Metabolic pathways
laq01110
Biosynthesis of secondary metabolites
laq01250
Biosynthesis of nucleotide sugars
Module
laq_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GLA29479_586 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GLA29479_586 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GLA29479_586 (rfbC)
Enzymes [BR:
laq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GLA29479_586 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF6600
Motif
Other DBs
NCBI-ProteinID:
ALN61471
UniProt:
A0A0S2F8G0
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All DBs
Position
complement(611818..612375)
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AA seq
185 aa
AA seq
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MKVIETDLPGCLVVEPRVFADSRGFFYESFNHDKLAEYGLAPQFVQGNVSSSSRGVLRGL
HYQWPKPQGKYISVIEGEVWDVAVDIRRGSPHYGRWTAVVLSAENKRHMWIPEGFAHGFV
TLSERAIFSYLCTQTYDASADAAIRWDDPDLAIDWPVSDPSLSAKDAAAPLLKDVVEDRL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatcgaaaccgatctgcccggctgcctcgtcgtcgaaccgcgggtgttcgct
gactcgcgcggcttcttctatgaatcgttcaaccacgacaagctcgccgagtacggcctg
gcgccgcagttcgtgcaaggcaatgtttcctcgtcgtcgcgtggcgtgctgcgcgggttg
cactatcaatggccgaagccgcaaggcaagtacatctcggtgatcgaaggagaggtctgg
gacgtggcggtggatattcgccgcggttcgccgcactacgggcgttggaccgcggtcgtt
ctgagcgccgagaacaagcggcatatgtggattccagagggtttcgcgcatggcttcgtc
acgttgagcgagcgggcgatcttcagttacctgtgtacgcaaacctacgatgcgagcgct
gatgcggcgattcgttgggacgatccggacctcgccatcgactggccggtcagcgatccg
tccttgtccgctaaggacgccgccgctcccttgctcaaggacgtcgtcgaagaccgcctg
ccggtctacacgccatga
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