Candidatus Liberibacter asiaticus psy62: CLIBASIA_04090
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Entry
CLIBASIA_04090 CDS
T00948
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
las
Candidatus Liberibacter asiaticus psy62
Pathway
las00521
Streptomycin biosynthesis
las00523
Polyketide sugar unit biosynthesis
las00541
O-Antigen nucleotide sugar biosynthesis
las01100
Metabolic pathways
las01110
Biosynthesis of secondary metabolites
las01250
Biosynthesis of nucleotide sugars
Module
las_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
las00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CLIBASIA_04090 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLIBASIA_04090 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLIBASIA_04090 (rfbC)
Enzymes [BR:
las01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CLIBASIA_04090 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF1106
DUF4360
Motif
Other DBs
NCBI-ProteinID:
ACT57392
UniProt:
C6XG89
LinkDB
All DBs
Position
901563..902159
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AA seq
198 aa
AA seq
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MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQR
PPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLE
MNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILPSVSEKDQNLPFLNQIDSPFE
YDGLPLLSLNMERDLLCV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaacattaatcccgtacgtattttaaaaacaagaaaatttgaagattctagaggatgg
ttttcccagacttatagtagtaaactattaaaagaacttggtttacaggatgtctttgtt
caggacaatcactctttttcttttgattgtggtacaataagaggattacattttcagcgt
cctccttatgctcaagcaaaacttgtgaggtgcattgctggtcgcatctttgatatcgct
gtggatatacggagaaattctccaacttatggatgttgggtttctttagaaatttcggca
aacaatggtttgcagatttatattcccaccggatttgcacatggatttatgactttagaa
atgaatacagaagtgatttataaagtcacagacttttattctgtagagcatgattctgga
gtggcttggcaagacaaaagtatagatataacatggccattattggatacaatattgcct
tctgtatctgagaaagatcaaaatcttccttttttaaatcaaatagatagtccatttgag
tatgatggcttgcctcttctttcactgaatatggagagggatttgctatgcgtctaa
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