Loxodonta africana (African savanna elephant): 100657080
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Entry
100657080 CDS
T04351
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X4
KO
K14328
regulator of nonsense transcripts 3
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100657080 (UPF3A)
03015 mRNA surveillance pathway
100657080 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100657080 (UPF3A)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100657080 (UPF3A)
mRNA cycle factors
P-body specific factors
100657080 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
100657080
NCBI-ProteinID:
XP_010591894
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MRSEKEAAGGAGATGAAVAARGSSGREKPSAPTPRGGPAMEVQFRWESPRREPEMPSASA
SSCRGGGGGAGKPREEKRTVLSKVVIRRLPPSLTKEQLDEQLHPLPAHDYFEFCTANLSL
YPHLYSRAYINFRNPDDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKISKKKLKKKDA
KTGSIEDDPDYKKFLEVYSMEEEKTSANPETLLGEIEAKTRELIARRTTPLLEYIKNRKL
EKQRIREEKREERRRRELEKKRLREEEKRKRREEERYKRKEADKQKKIVEKEIRIKDRPA
MQLYQPGARTRARLGSTSNACECGGRPAEESGDGRKREAEASTGTVSKKSEEVEQTRV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggagaaggaggcggctggtggcgccggggcgaccggggctgcagtggcagct
cgaggctcgagtgggagggagaagccgtcagcgcccactccccgcggggggccggccatg
gaggtccagttccgctgggagtcgccgcggcgagagcccgaaatgccgtctgcctccgcc
tccagctgtaggggtggtgggggcggggcgggcaaacctcgcgaggagaagaggacggtt
ctgagcaaggttgtcatacggcggcttcctcccagtctcaccaaggagcagctggacgag
cagctacatccgcttcctgcacacgactattttgagttctgtactgccaatcttagtctt
tatcctcatctctactcaagagcatacattaattttagaaatcctgatgacatccttctt
tttagagatcgttttgatggatatatcttcattgacagtaaagggttagaataccctgca
gtagtagagtttgctccattccaaaagatatccaaaaagaagctaaagaaaaaagatgcc
aaaactggaagcatcgaagatgatccagactataagaagtttttagaagtgtactctatg
gaagaagagaaaactagtgccaatcctgaaactcttctgggagagatagaggcaaagaca
agagaactcatcgctagaagaaccacacctcttttggagtacattaaaaatagaaaatta
gaaaagcagcgaattcgagaagagaagcgagaagaacgaaggaggagggagttagaaaag
aaacgcttgcgggaagaggagaaaagaaaaagaagagaagaagaaagatataaaagaaaa
gaggcagacaaacaaaagaaaattgttgagaaagaaataaggatcaaggaccggccagcc
atgcagttataccagccaggcgctcgcacccgagcccgtttgggctctacaagtaacgcc
tgtgagtgtggtgggagacccgccgaggagagcggtgatgggaggaagcgtgaggcagaa
gcctcaaccggaactgtgtctaagaagagcgaagaggtggagcaaacccgtgtgtaa
DBGET
integrated database retrieval system
