Loxodonta africana (African savanna elephant): 100662584
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Entry
100662584 CDS
T04351
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100662584 (UPF3B)
03015 mRNA surveillance pathway
100662584 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100662584 (UPF3B)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100662584 (UPF3B)
mRNA cycle factors
P-body specific factors
100662584 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100662584
NCBI-ProteinID:
XP_003414824
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGESGKGEDKQDRNKEKKEALSKVVVRRLPP
TLTKEQLLEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYATDNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKVDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
PKKLDKENLNDERASGQSCSLTRRSDGELKDEKLKRPEDENSRDYRERERDYDRDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKEALRDKGKRNESTESMGNSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCAPDDSTKSADSAIEKKQESAISHRKEA
GDE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggaaaaggagcataggcccaaggagaaacgagtaaccctgttaacgcccccg
ggggccacaggcagcggcggtggggcttcgggggaaagcgggaagggggaagataaacag
gatcggaacaaggagaagaaagaggcgctgagcaaggtggtagttcgaagattacctccc
actttgaccaaggagcagcttctggaacatcttcagcctatgcccgagcatgattatttt
gagtttttttctaatgataccagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaagaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaaaactaagaaaagagataccaaagttgggactatcgatgatgatccagagtat
agaaaatttttggaaagctatgcaacagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaagagagaggaaagaaggagg
cgagagatagaaagaaaaagacaaagagaagaagagaggagaaaatggaaagaagaagag
aaacgaaaaagaaaagatatagaaaagctaaagaaggtagacagagttccggaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaaaggggatgaaaaagaattggacaaaagagaaaag
cccaagaaattggacaaagagaatctgaatgatgaaagagctagtgggcagagttgttct
ttgaccaggcgttctgatggtgaacttaaagatgaaaagctaaagagacctgaagatgaa
aatagcagggactacagggagagggaacgggattatgaccgagatcaagaacgcatactt
cgggagagagagagactgaaacggcaagaagaagaacgccgtaggcagaaggagcgctat
gagaaagagaaggcttttaaaagaaaggaagaagaaatgaaaaaagagaaagaagcactt
agggataaaggaaagaggaacgaaagtacagaatcaatgggcaactcagaaaaaactgaa
aaaaaagaggaagtggttaagagagatcgcataagaaacaaggaccgtccagcaatgcag
ctttaccaaccaggagctcgaagccgaaaccgactctgtgccccagacgacagcaccaag
tctgcagattcagcaatagaaaaaaagcaggaaagtgctattagccatagaaaagaagca
ggagacgagtga
DBGET
integrated database retrieval system
