Loxodonta africana (African savanna elephant): 100670440
Help
Entry
100670440 CDS
T04351
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lav01002
]
100670440 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100670440 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lav04147
]
100670440 (USP13)
Enzymes [BR:
lav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100670440 (USP13)
Peptidases and inhibitors [BR:
lav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100670440 (USP13)
Ubiquitin system [BR:
lav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100670440 (USP13)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100670440 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_3
UBA_4
Motif
Other DBs
NCBI-GeneID:
100670440
NCBI-ProteinID:
XP_003412921
UniProt:
G3UDC0
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MQRRGALFSVPGGRGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYDYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSILCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHTCG
TENGLQDNDINDIKPRVSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSI
PEFQRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVIKEDH
KPQQNGISPRMFKAFVSNSHPEFSSNRQQDAQEFFLHLVNLVERHRIGSENPSDVFRFLV
EERIQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAETNRRPLPELVRA
KIPFSACLQAYSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPK
KFDVSIDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESS
VMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIIHMEEPDFAEPLTIPGYGGAASAGAS
AFGATGLDNKPPEEIVAIITSMGFQRNQAVQALRATNHNLERALDWIFGHPEFEEDSDFV
IGMENNANANIISEAKPEGPRVKDGSGTYELFAFISHMGTSTMSGHYVCHIKKEGRWVIY
NDHKVCASERPPKDLGYLYFYCRIPT
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgcccttttcagcgtgccgggcggcagaggcagcaggaagatggct
gcaggagacatcggcgagctgctggtgccccacatgcccacgatccgagtgcccaggtcc
ggggacagggtctacaagaatgagtgcgccttctcctacgactcccccaattctgaaggt
ggactctatgtatgcatgaatacatttttggcctttgggagggaacacgttgaaagacat
tttcgaaaaactggacagagcgtatacatgcacctgaaaagacacgtgcgagagaaggta
agaggggcatctggtggagctttaccaaaaagaaggaattccaagatttttttagatcta
gatactgatgatgatttgaatagcgatgattatgattatgaagacgaagccaaactcgtt
atattcccagaccactatgaaatagcactacccaatattgaggagttaccagccttggta
acaattgcttgtgatgctgttcttagttcaaaatctccgtacagaaagcaagacccagac
acatgggaaaatgaattgccagtatccaagtacgccaataacctgacccagctggacaac
ggagtcaggattcctccaagtggctggaagtgtgccaggtgtgacctgcgggaaaacctc
tggttgaatctgaccgacggctccatcctgtgtgggaagtggttctttgacagctccggg
ggcaatgggcatgctctggagcattacagagacatgggctacccgctggctgtgaaactg
ggaaccatcactccggacggggcagatgtttattcttttcaagaagaggaacctgtttta
gaccctcatttggccaagcacttagcacattttggaattgacatgcttcacacgtgtggg
acagagaacgggctccaggacaatgacatcaatgacatcaaaccgagggtcagcgagtgg
gaagtcattcaggagtcggggacgaagctgaagcccatgtatggccccgggtacacaggt
ctgaagaacctgggcaacagctgctatctcagctccgtcatgcaggccatcttcagcatc
ccagagtttcagagggcgtatgtaggaaaccttccaagaatatttgactactctccttta
gatccaacgcaggatttcaacacacagatgactaagttaggacacggccttctctcaggc
cagtattcaaaaccgccagtgaaatctgagctcattgaacaggtgattaaagaggatcac
aagcctcaacagaatgggatctctccacgcatgtttaaggccttcgtaagcaatagccac
ccagaattctcgtcgaatagacaacaagatgcccaggagtttttcttgcacctggtgaac
ctagtagagaggcaccgcatcggctcagaaaacccaagtgatgttttccggtttttggtg
gaagaacgtattcagtgctgtcagacccgcaaagtccgttacacagagagggtggactac
ctgatgcagttacctgtggccatggaggcagcaaccaacaaagatgaactgattgcctat
gaattaacgagaagggaagcagaaacaaacagaagacccctgcccgagctggttcgagcc
aagataccatttagtgcctgccttcaggcctattcggaaccagaaaatgtggacgatttc
tggagcagtgctctacaagcaaagtctgcgggtgtgaaaacatcccgctttgcctccttc
cctgaatacttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaaa
aaatttgacgtttctattgacatgccagacctacttgatatcaaccatcttcgagccagg
gggttacagccaggagaggaggaacttccagacatcagcccccccattgtcattcctgat
gactccaaagatcgcctgatgaaccaactgatagacccatcagacatcgatgagtcttca
gtgatgcagctggctgaaatgggcttccctctagaagcctgtcggaaggctgtgtacttt
actggaaatatgggagccgaggtggccttcaactggatcattattcacatggaagagccg
gattttgctgaaccactgaccatacctggctacggaggagcagcttctgctggagcgtca
gctttcggtgctactggtttggataacaagcctccagaggaaattgtagccatcatcacc
tccatggggttccagcgaaatcaggctgttcaggcactccgagcaacgaatcataacctg
gaaagagccctggattggatcttcggtcaccctgagtttgaagaggacagcgactttgtg
attgggatggagaataatgccaatgcaaacattatttctgaggccaagcctgaaggacct
agagtcaaggatggatctggaacatatgaattatttgcattcatcagtcacatgggaacg
tctacaatgagtggccattatgtttgccatatcaaaaaggaaggaaggtgggtgatctac
aatgaccacaaagtttgcgcctcagaaagaccccccaaagacctgggctacttgtacttt
tactgcaggataccaacctaa
DBGET
integrated database retrieval system
