Loxodonta africana (African savanna elephant): 100672225
Help
Entry
100672225 CDS
T04351
Symbol
FANCM
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100672225 (FANCM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100672225 (FANCM)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100672225 (FANCM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
HHH_2
Motif
Other DBs
NCBI-GeneID:
100672225
NCBI-ProteinID:
XP_010586916
LinkDB
All DBs
Position
Unknown
AA seq
2044 aa
AA seq
DB search
MSGRQRTLFQTWGSSVSRSVDASGRSSGTERPQSPGTSKSRFPAPAEAAEAQPESDDDVL
LVAVYEAERQLSLKDGGFCKSAGAVWIYPTNCPVRDYQLHIARTALFCNTLVCLPTGLGK
TFIASVVMYNFYRWFPSGKVVFMAPTKPLVAQQIEACYRVMGIPQSHMAEMTGSTQAFTR
KDIWHNKRVLFLTPQVMVNDLSRGACPAAEIKCLVVDEAHKALGNYAYCQVVRELVKYTN
HFRILALSATPGSDIKAVQQVITNLLIGKIELRSEDSPDILPYSHERRVEKVVVPLGEEL
AAIQKAYIQILEAFASSLIQRNVLMRRDIPSLTKYQLILARDQFRKNPSPNIVGLQQGII
EGEFAVCISLYHGYELLQQMGMRSLYLFLCGIMDGTKGMTRTKNELGRNEDFMKLFSHLE
GMFAHTRNTSESGVSAIRKGDKDKKFFYSHPKLKKLEEVVVQHFKSWNDQNTSKKKCDET
RVMIFSSFRDSVQEIAEMLFQHQPVIKVMTFVGHSSGKSTKGFTHKEQVEVVKQFRDGGY
NTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGRTGRKRQGRIVVILAEGREERT
YNQSQSNKRSIYKAISGNRQVLHFYQGSPRMVPDGITPELHKMFITHGVYEPEKPSWNLQ
RMRQNNSKKDWSLSEEEFKLWNRLYRLRDGDEIKEITLPQVHFPSLQNKELRSAQEPAIG
IHQLSLSEWRVWQDHPLPIHLVDHSDRCHHFISIMQMIEGMRHEEEECSYELEIKPYLQM
EDVNSTFSVPRNEYSPLADGIFTDNKESLFTKAVNQGHSSLVTEYDEECSEILKQSHIKP
TKVVSLKNKASKEMIKDKPRKENDGVMDSFDTKGNSTAENTFQVDLPSDKMASDTDEVAA
TCSTDKNVVNQPCVLLTKCQVTNKSSSSFAGNFSDSGYNSFSDEKSVSSSLCLPFEEELY
LARTDDQFYNCHSLTKKALANVDRFLSHSPPPLSELADLEYEITKDSILENSVSLPYTEH
LQNDKSTCLMSLAAMNSQRSLDLNSLNIPSSNNNHLSPISCLYDANNEKICNGSICCDYN
DEVHGDIQDENLVPNNHVQVNTGPSRYLVKEKNHDVDNSGLPVLSTDQDESLLLFEDVNT
EFNDVSLSPFNSKCKPSGVSDKTAVSEMAPISQFLITDELLLDNDSEPQDQIICDTNNWK
PHESLRGVHKEKLKNGEYAFDCSKDLFSVTFDLGFCSQDSDDEILEHSSDKNKNRLLNDP
SGRYLGTKEISDANYVSNQALIPGHHVGSFMRRSITIQSKEDKQSPNLALFPLGTAKNKE
FASPGYSQFSLPVGEKAVSTPLSKSNALNSCSKMREEMPKTPDSNKKKLQSLKESLNSTF
DLGLSPVKPKSSAQISLRPSCHYFVEEQLLTSSESEDDEIFQRKSKKTKRNVLKSPEDQK
NSEVDSPLHAVKKRRVPLNRSELSSSDESENFHKLHPYLEDFKDCNKNSKRGVKVQKIHS
HIKRVARQFLDDEAELSQEDAECASSDEDESENEQDSSLLDFLNDETQLSQAINDSEMRA
VYVKSLRSPLMSNRYKMVHKKHNINIFSQIPEQDETYLEDSFCVDEEESCKSQSGEEEVC
VDFNLITEDCFANGSKKYKTRRAVMLKQMKIQQNCALSKKKFSRIILPDDSSEEENNVNK
KRDFNTVVNPTTVNKNEQQDHCLNLAPSGSLLQSKVHSNPIVNQSPKQIQKTPLNLKDTV
SEVLDFKPQSRNKIGSTSPSFAIDSQKDCGKFPVQLKVGSTLEDSSTSVACCSNSRPYLA
GIHTSRLPQEGTRTRILVDSREIASGAEVISSLRAIHGLEVEVCPLNGCDYIVSNRMVVE
RRSQSEMLNSVNKNKLIDQIQHLQSMFERICMIVEKDREKTGDTSRMFRRTKSYDSLLTA
LISAGIRILFSSCQEETADLLKELSLVEQRKNVGIHVPTVVNSSKWNVLHFYLSIPNVSY
ITALNMCHQFSSVKKMANSSPQEISMYAQVTHRKAEEIYAYIHYVFDMQMLPDSLNQCRL
KSDA
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacggcaaagaacgcttttccagacgtggggctcaagcgtctcccgatctgtc
gatgcttcgggtcgcagctccggaactgagcggcctcagagccctggcacctccaagtcg
cgtttccctgcaccggcagaggctgcggaggctcagccggagtcggacgatgatgtgctt
ctggtcgcggtgtatgaggctgagaggcagctgagtctaaaggatggcgggttctgcaag
tcagcgggcgccgtgtggatttacccaaccaactgcccggtgcgggactaccagctgcat
atcgcccggaccgctctgttctgcaacacgctggtctgtttgcccaccgggctgggcaag
acctttattgcctccgtggtcatgtacaatttctaccgctggttcccttccggcaaggtg
gtcttcatggctcccacgaaacccctggtggcacagcagatcgaggcttgctaccgagta
atgggtataccgcagtcccacatggccgaaatgacaggatctactcaagctttcaccagg
aaggacatatggcacaataagagagtcctttttcttacgcctcaggtcatggtaaatgac
ctttctagaggagcttgtcctgctgctgaaataaagtgtctggttgttgatgaagctcat
aaagcacttggaaactatgcttattgtcaggttgtaagggaactagtcaaatacacaaat
cactttagaatcttggctctcagtgccaccccaggtagtgatataaaggctgtgcaacag
gttattactaacctactgattgggaagatagagcttcgttctgaagattctccagatatt
ttaccatattctcatgaaagacgagttgagaaggttgttgttccccttggtgaagaactt
gcagcaatccaaaaggcatatatccagattttggaagcatttgccagttctttgattcag
aggaatgttttaatgagaagggatatccccagccttacaaaataccagctaattctggca
agagatcaatttaggaaaaacccatctccaaatattgtgggactacagcaaggcataatt
gagggagagtttgctgtttgtattagtttatatcatggttatgaattactgcagcaaatg
ggaatgagatcattatatttattcctttgtggaattatggatggaactaaaggaatgact
cggacaaaaaatgaactcggccgaaatgaagacttcatgaaactctttagtcatctagag
ggcatgtttgcacatacacgtaatacttcagaaagtggtgtttctgctatccgaaaagga
gacaaagataagaaatttttctatagtcatccaaagctaaagaaattagaagaagttgta
gttcagcacttcaagtcatggaatgatcagaacacctccaaaaagaaatgtgacgagacc
agagttatgatcttctcatcatttcgagatagtgttcaagaaattgcagaaatgcttttt
caacatcagccagttattaaagtaatgactttcgttggccattcctcagggaaaagcacg
aagggttttacccacaaggagcaagtagaggtagtgaaacagtttcgtgatggtggttac
aacacattggtttctacctgtgttggtgaagaaggcttggatataggggaagttgatctt
ataatatgttttgacgcccagaagagcccaattcgtcttgtacaacgaatgggtagaact
ggccgcaaacgtcaaggcaggattgttgttatccttgctgaaggacgagaagaacgtact
tataatcaaagtcaatccaacaaaagaagtatttataaagctatttcaggtaacaggcag
gtccttcatttttaccaaggaagtccgcgaatggttcctgatggaatcactccagaatta
cacaaaatgttcatcacacatggcgtctatgaaccagagaagccttcttggaacttgcag
cgaatgaggcagaataactcaaagaaagattggtccttatcagaagaagaatttaaatta
tggaacagactttatagattaagagatggcgatgaaattaaggagataacattgcctcaa
gttcattttccatctttacaaaataaggaactcagatcagctcaagaaccagccattgga
attcatcagctctctctctctgaatggagagtgtggcaggatcatcctcttcctatccat
ctggttgaccattcagatcgatgccaccattttataagcattatgcaaatgatagaagga
atgcgacatgaagaggaagaatgtagctatgaactggaaattaaaccttatttacaaatg
gaggatgttaactcaacatttagtgtacccaggaacgaatatagtcctcttgctgatggc
atctttactgataacaaggaatctttatttacaaaggctgtaaatcaaggccattcatcc
ctagtgactgaatatgatgaagaatgttctgaaattcttaaacagtctcatattaaaccc
actaaagttgtttctctaaagaacaaagcttctaaagaaatgataaaagataagcctaga
aaagaaaacgatggtgttatggattcctttgataccaaaggaaattctactgctgaaaac
acttttcaggtagacctaccaagtgataaaatggcatcagatacagatgaagttgctgcc
acatgttctaccgataaaaatgttgttaatcagccatgtgttttattaaccaagtgtcag
gttacaaataaatcttctagttcatttgctggaaatttttcagattctggctataacagt
ttcagtgatgaaaaatcggtttcatctagcttatgtcttccatttgaagaagagctttat
ttagctagaactgatgatcaattttataattgtcactcattgacaaaaaaggcactagct
aacgtagaccgatttttatctcattctcctccgcctctcagtgaactcgcagatttggaa
tatgaaatcacaaaggattctatacttgaaaattcagtttccctaccctacacagagcat
ttacaaaatgataagtccacctgtttgatgtcgctggcagctatgaattcccaacggagt
ttagatttgaattcactaaacataccatcttctaataataatcacctttctccaataagt
tgcctttatgatgcaaataatgaaaaaatttgtaatgggtcaatctgctgtgactacaat
gatgaagtacatggagatattcaagatgaaaacttagtacctaacaatcatgttcaagta
aacacaggcccttcaaggtatttagttaaagaaaagaatcatgatgttgataacagtggc
ctcccagtattatccactgatcaggatgagagcttactattgtttgaagatgttaataca
gaatttaacgatgtgagtctttctccctttaacagtaaatgcaaaccttcaggtgtgtca
gacaaaactgctgtaagtgaaatggcaccgatctctcagttcttaattactgatgaactt
ttgttagacaatgattctgaaccccaagatcaaatcatctgtgatactaataattggaaa
cctcatgaaagtttgagaggtgtacataaggaaaaactgaagaacggagaatatgctttt
gactgctctaaggatttattctctgttacctttgatttgggattttgtagtcaagattct
gatgatgaaatattagaacattcatcagataaaaataagaatagacttctaaatgatcca
tctggaaggtatttaggtactaaggagataagtgatgcaaattatgtttcaaatcaagca
ttaataccaggacatcatgtcggaagttttatgaggagaagcattactatccaatcaaag
gaagataagcagagtccaaatcttgcactttttccactgggtacagcgaaaaataaagaa
tttgcgtctcctggttattctcagttttctttaccggtaggagaaaaagctgtgagtaca
ccactttctaaatcaaatgcattgaactcatgttctaagatgagagaggaaatgcctaag
acaccagattctaataaaaaaaagctacaaagtttgaaagaaagtttgaattcaaccttt
gatttgggactatctccagtaaagccaaaaagcagtgcacaaatcagtctccgtccatcc
tgtcattattttgttgaagaacaattattaacaagtagtgaaagtgaagatgatgaaatt
ttccaaagaaaaagtaagaaaacaaaaagaaatgttttaaaatcccctgaggatcagaaa
aatagtgaagttgattctccacttcatgctgttaaaaagcgcagagttcctctaaacaga
tcagaattatcatctagtgatgagagtgagaattttcacaaactacatccatatttagaa
gacttcaaggattgtaacaagaattcaaaaagaggtgtcaaagttcaaaaaatacacagc
cacataaagcgtgtagctaggcagtttttggatgacgaagcagaactttcccaagaagat
gccgagtgtgcttcatcagatgaagatgagtcagaaaatgaacaagattcctcattactc
gacttcttaaatgatgagactcaactttcacaggccattaatgattctgaaatgagagct
gtttatgtgaaatctttacgcagtccattgatgagcaatcggtacaaaatggttcataag
aaacataacataaacattttctcacagattcctgagcaagatgaaacgtatttggaggac
agtttttgtgttgatgaagaagagtcttgtaaaagccaatcaggtgaagaagaagtgtgt
gttgattttaacttaataactgaagattgctttgcaaatggaagtaaaaaatataagact
aggcgtgcagtaatgctaaaacaaatgaagatccaacaaaattgtgcactttctaaaaag
aaattttccagaattattttaccagatgattcaagcgaggaggaaaataatgtaaataag
aaaagagatttcaatactgtggttaacccaaccactgttaacaagaatgaacaacaggac
cattgtttgaatttagcaccttctgggtcattgttgcagtccaaggtccattctaatcca
attgttaatcaatcacccaagcagatacaaaagacaccacttaatctaaaagatacagtt
tctgaagtcttggacttcaagcctcagagccgtaataaaattggatctacttcaccatct
ttcgctattgattcacagaaagactgtggaaaatttccagttcaactgaaggttggtagc
actctggaggattccagcacttcagtggcatgttgttccaattcaagaccatatttagct
gggatacatacttctagacttccacaggaaggaacaagaacccgtattcttgtagatagt
cgtgaaatcgcttcaggcgcagaagtaatttcttccctaagagcaattcatgggttagaa
gtagaggtttgtcctcttaatggttgtgattacatagtgagtaaccgcatggtggtggaa
aggaggtctcaatctgagatgttaaatagtgtcaataagaacaagctcattgaccagatc
cagcacctgcaaagcatgtttgaaagaatatgtatgattgtggaaaaggacagagaaaaa
acaggagacacctcaaggatgtttaggagaacaaagagctatgacagcctgctgactgcc
ttaataagtgctggaatccgaattcttttcagttcctgccaagaagaaaccgcagatttg
ctaaaggaactgtctttagtggaacaaagaaagaatgttggtattcatgttccaacggta
gtgaacagtagtaaatggaacgtacttcatttttatctaagtattcccaatgtaagttat
ataactgcattaaatatgtgccaccagttttcatcagtgaaaaaaatggctaacagctca
cctcaagaaatctccatgtatgcacaagtaacacatcgaaaggccgaggagatctatgcc
tatattcattatgtatttgacatgcaaatgttaccagacagtcttaaccagtgcagactg
aagtccgacgcatga
DBGET
integrated database retrieval system
