Loxodonta africana (African savanna elephant): 100674057
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Entry
100674057 CDS
T04351
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100674057 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lav04147
]
100674057 (COPB1)
Membrane trafficking [BR:
lav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100674057 (COPB1)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100674057 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
100674057
NCBI-ProteinID:
XP_003412045
UniProt:
G3SXN0
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKVALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgctgagaacgtgtgctatacgttaattaacgtgccaatggattcagaacca
ccatcggaaattagcttaaagaatgatctagaaaaaggagatgtgaagtcaaagactgaa
gctttgaagaaagtaatcataatgattctgaatggtgaaaagcttcctggacttctgatg
acaatcattcgttttgtgctcccacttcaggatcacaccatcaaaaaattactcctggtg
ttttgggaaattgttcctaaaacaactccagatgggagacttttacatgaaatgatcctt
gtttgtgatgcatatagaaaggatcttcagcatcctaatgagtttattagaggatctact
cttcgttttctctgcaaattgaaagaagcagagttgttagaacctttaatgccagctatt
cgtgcttgtttggagcatcgacacagctatgttagaagaaatgctgttttggccatctat
actatctacaggaattttgaacatcttatacctgatgcacctgaactgatacatgatttt
ctggtgaatgagaaggatgcaagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggaccgagctttggattacctgagtacttgtattgatcaagttcaaacatttgga
gacattcttcagttagttattgttgaactaatttataaggtctgtcatgctaatccatca
gaaagggctcgtttcattcgctgcatctataacttattacagtcatctagccctgctgta
aaatatgaagctgctggaaccttagtgacactctctagtgcaccaactgcaatcaaggct
gctgctcagtgttacattgatttaattattaaggagagtgataacaatgtaaagctcata
gttctggatcgtttgatagaattaaaagaacatcctgctcatgagcgagtactacaggat
ctggttatggacatcctaagagtattgagcacaccggacttagaagtacgcaagaaaact
ctacagttagcactggatcttgtgtcttctaggaatgttgaagagctcgttattgtcctg
aaaaaggaagtgattaaaaccaataacgtatctgagcatgaagatactgacaaatacaga
caactccttgtgcgaacattgcattcctgttctgtccgatttccagatatggctgcaaat
gtcattcctgtgttaatggaatttctcagtgacaataatgaagcagcagctgctgatgtc
ctggagtttgttcgtgaagccattcagcgctttgataacttgagaatgcttattgttgaa
aagatgcttgaagtctttcatgctattaaatctgtcaagatttaccgaggagcattatgg
atcctgggagaatactgtagtaccaaggaagacattcagagtgtgatgaccgaggtccga
aggtccctaggggagatcccaattgtagaatcagaaataaagaaagaagcaggtgaatta
aaacctgaagaagaaataactgtggggccagttcagaaattggtaactgagatgggcacc
tatgcaactcagagtgcccttagcagttctagacccaccaagaaagaggaagacagacct
cccctgagaggattccttctggatggagatttctttgttgctgcctctcttgccacaact
ctgaccaaggtcgccttgcgctatgtagctttggttcaggagaagaagaagcaaaattct
tttgttgctgaggctatgttgctcatggctactatccttcatttgggcaaatcctcactt
cctaagaagccaattacagatgatgatgtagatcgaatttccctgtgcctcaaggtctta
tctgaatgttcacctttaatgaatgacatttttaataaagaatgcagacagtccctttct
cacatgttatctgctaaacttgaagaagagaagctatcccagaagaaagaatctgaaaag
aggaatgtgacagtacagcctgatgaccccatttccttcatgcaactaactgctaagaat
gaaatgaactgcaaggaagatcagtttcagctaagtttgctggcagcaatgggtaacaca
cagagaaaagaggcagcagatcctctggcatcgaaacttaacaaggtcacccaactgaca
ggcttctcagatcctgtatatgcagaagcttatgttcatgtcaaccagtatgatatcgtc
ctggatgtacttgttgtgaaccaaaccagtgatactttgcagaactgcacattagagtta
gctactctaggggatctgaaacttgtggaaaaaccatctcctttgactctggctcctcat
gattttgcaaatattaaagctaatgtcaaagtagcatcaacagaaaatggaataattttt
ggtaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtggtcctcagt
gatatccacattgacatcatggactatatccagcctgcgacttgcactgatgctgagttc
cgtcaaatgtgggctgaatttgaatgggaaaacaaagtgacggttaacacaaatataatt
gatttaaatgaatacttacagcacatattaaagtcaaccaatatgaaatgccttacccca
gagaaggccctctctggttactgtggctttatggcagccaacctctacgctcgctccata
tttggagaagacgcacttgcaaatgtcagcattgagaagccaattcaccaaggaccagag
gcccctgttactggccatataagaattcgtgcaaagagtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaaccagtatataa
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