Loxodonta africana (African savanna elephant): 100676316
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Entry
100676316 CDS
T04351
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lav03009
]
100676316 (DDX21)
03036 Chromosome and associated proteins [BR:
lav03036
]
100676316 (DDX21)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100676316 (DDX21)
Ribosome biogenesis [BR:
lav03009
]
Eukaryotic type
Pre-60S particles
Helicases
100676316 (DDX21)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100676316 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100676316
NCBI-ProteinID:
XP_003409350
UniProt:
G3T0Y0
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MPGKLLSDAALESDTTMGKLEIPPKQNEKKAKKEKPKSNKTEESADEKEETSSPKAKKMK
KKAEPSEVEINSPKSKKVKKKEEQSQDDAMSPKTKNVKKKKEPVENQVGSPKIKKAIKNE
EPFEKEMGAPKPKKIKKEKEMNGEIGEKKPKLKNGLPHSGPASNSSEATSEESNSELEQE
IPVEQKEGAFSNFPISEATVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTF
SFAIPLIEKLHGELQDKKRGRPPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTPY
GGQFERMRNGIDILVGTPGRIKDHLQNAKLDLTKLKHVVLDEVDQMLDMGFADQVEEILS
VAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKC
HWTHRATVIGDVIRVYSGYHGRTIIFCETKKEAQELSQNASIKQDAQSLHGDIPQKQREI
TLKGFRNGAFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGVCI
CFYQYKEEYQLAQVEQKAGIKFKRIGVPSATEIVKASSKDAIRYLDSVPPTAISYFKQSA
EKLIEEKGAVEALAAALAHISGATAVDQRSLISLDVGLVTMILKCSIEMSNISYAWKELK
EQLGEDIDSKVKGMVFLKGKLGVCFDVPTAAVTEIQEKWHDSRRWQLSVATEQPELEGPR
EGYRGSRGPREGNRGFRGQREGSRGGFRGRREGSRGGFRGQRSGGGNRNNRFQNKGQKRS
FSKAFGQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccttagtgacgccgctttggaatcagacacgaccatgggaaagctg
gagataccgccaaagcaaaatgagaagaaagctaagaaagagaagccaaaatctaataag
actgaagagtcagcagacgaaaaggaggaaactagttcccccaaagctaaaaaaatgaaa
aagaaagcagagccttctgaagttgagattaattctcccaaatccaaaaaggtaaaaaag
aaagaagagcaatctcaagatgacgctatgtctcctaaaaccaaaaatgtaaaaaagaaa
aaggaacctgttgaaaatcaagttgggtctcctaaaatcaaaaaagcgataaaaaatgag
gagccttttgaaaaagaaatgggtgctcctaagcctaagaagataaagaaagaaaaggaa
atgaatggagaaattggagagaaaaagcccaaactgaagaatggacttcctcattctgga
cctgcctctaactccagtgaagccacaagtgaagagagtaatagtgaactagaacaggaa
ataccagtggaacagaaagaaggagctttttctaattttcccatatctgaagcaactgtt
aaacttctcaaagctcgtggggtgaacttcctgtttcctatacaagcgaagacttttcat
catgtttatagtgggaaggatttaattgcacaggcacggacaggaactgggaagacattc
tcctttgccatccccttgattgagaaacttcatggagaactgcaagacaagaagagaggc
cgtccccctcaggtactggttctagcacctacaagggagttggcaagtcaagtaagcaga
gacttcagtgacatcacaaaaaagctggcagtggcttgtttttatggtggaacgccctat
ggaggtcaatttgaacgcatgcggaatgggattgacatcctggttgggacaccaggtcgt
atcaaagaccacctacagaatgccaagctagacctcaccaaacttaagcatgttgtcctg
gatgaagttgaccagatgttggacatgggttttgctgatcaagtggaagagattttaagt
gtggcgtacaagaaagattcagaagacaatccccaaacgttgcttttttctgcaacttgc
cctcattgggtatttaatgttgctaagaaatacatgaaatctacatatgagcaggtggac
ctgattgggaagaagactcagaaaactgcaataactgtggagcatctggctatcaagtgc
cactggactcacagggcaacagtcattggggatgtgatccgggtgtatagtggttatcac
gggcgcacgatcatcttctgtgaaaccaagaaagaagcccaggagctgtcgcagaatgca
tccataaagcaggatgcccagtcactacacggtgacattccacagaagcaaagggaaatc
accctgaaaggttttagaaatggtgcttttggtgttttggtggcaaccaatgtcgctgca
cgtgggttagatatccctgaagttgatctggttgtacaaagctctccaccaaaggatgtg
gagtcctacattcatcggtctgggcgaacgggtagagctggaaggacaggagtctgcatc
tgcttttatcagtataaggaagaatatcagttggcacaagtggagcaaaaagcgggaatt
aaatttaaacgaataggtgtaccttctgcaacagaaatagtaaaagcttccagcaaagat
gccatcaggtatttggactctgtgcctcccactgccattagctacttcaagcagtcagct
gagaaactgatagaggagaagggagccgtggaagccctggcggcggcactggcccacatt
tcaggcgccacagcggtggaccagcgctccttgatcagcttggatgtgggccttgtgacc
atgatcttgaagtgctcaattgaaatgtcaaatattagttatgcttggaaagagcttaaa
gagcagctgggtgaagacattgactccaaagtgaagggaatggtcttcctcaaaggaaag
ctgggtgtttgttttgatgtccctactgcagcagtaacagaaatacaggaaaaatggcat
gactcacggcgctggcagctctctgtggccactgagcaaccagaactggaaggaccgcgg
gaagggtatcgaggctccagggggccgcgggaaggcaatcgaggtttcaggggacagcgg
gaaggaagcagaggaggcttcagaggacggcgggaaggaagcagaggaggcttcagggga
cagcgatcaggaggtggcaacagaaataacagattccaaaacaaaggccagaagcggagt
tttagtaaagcatttgggcagtaa
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