Lysobacter avium: INQ42_00120
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Entry
INQ42_00120 CDS
T08144
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
lavi
Lysobacter avium
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_17
AAA_5
HTH_23
HTH_7
HTH_38
HTH_28
HTH_30
AAA_16
HTH_11
AAA_3
VpsR
Mg_chelatase
AAA
HTH_22
HTH_29
RWP-RK
AAA_22
AAA_2
HTH_Tnp_1
TnsD
Motif
Other DBs
NCBI-ProteinID:
QOW22084
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Position
complement(25339..26670)
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AA seq
443 aa
AA seq
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MAVVPALPTQCVIWFGEPLRHERAALGAAGWQVRAANADDGIGLRAGDTVVGVLDLRDGS
HGCLDRLERLTDDHDYLSLLAVVPGETSHSPARHRVLDQCAAILTAPLDLSRLIQTLGRL
AHDPLSNPIHALDALIGASPAMRDIHGTIRKFAPVDLPVLITGQTGTGKDVAARVLHELS
VRRHARFAAVNCGALSPNLVQSELFGHERGAFTGANARRTGLFESANGGTVFLDEIGDLP
LEAQTNLLRVLQEHSVQRVGSHESIPVDVRVLAATNVDLEAAVAAGKFRNDLFYRLNVLR
LHMPPLHERGQDILLLAGHFLSAFRESNPTRARAFSADAQKAMLGFDWPGHVRELINRVQ
RAAVIANGELISAEELGLCGKPQPPAGDGALDTARESAERETILACLRESGFNISETARR
LKVSRVTVYRLCRKHKLDLAQLR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgttccagcgcttcccacgcaatgcgtgatctggttcggagaaccgctgcgc
cacgaacgcgccgccctgggcgccgccggctggcaggtgcgtgcagccaatgccgacgat
gggatcggactgcgcgcaggcgacaccgtggtcggcgtgctggaccttcgcgacggcagc
cacggctgcctggaccggctggagcgtctcaccgatgaccacgattacctgtcattgctg
gcggttgtgcccggagagaccagccactcgccggcccgccaccgcgttctggaccagtgc
gcggcgatcctgaccgcaccgctggacctgtcccggctgatccagaccctgggccgcctg
gcgcatgatccgctcagcaatcccatccacgcgttggatgcgcttatcggcgccagcccc
gcgatgcgggacatccacggtaccatccgcaagttcgcaccggtcgacctgccggtgctc
atcaccggccagaccggcaccggcaaggatgttgccgcgcgcgtgctgcacgagctgtcg
gtgcgtcgccacgcgcgtttcgctgcggtcaactgcggcgcgctgtcgcccaatctggtc
cagtcggaactcttcggacacgaacgtggtgcctttaccggtgccaatgcgcggcgcacc
gggctgttcgagagcgccaacggcggcacggtgttcctggacgagatcggcgacctcccg
ctggaagcgcagaccaacctgttgcgcgtgctgcaggaacacagcgtgcaacgcgtgggc
agccacgaatcgattccggtggatgtgcgggtgctggcggccaccaatgtcgatctggaa
gccgccgtcgcggccggcaagttccgcaatgacctgttctaccgcctcaatgtcctgcgg
ctgcacatgccaccgctgcacgagcgcggccaggacatcctcctgcttgcagggcatttc
ctgagtgcgttccgggaatcgaacccgacccgcgcgcgcgccttcagcgcggatgcgcag
aaggccatgctggggtttgattggcccggacacgtacgcgagctgatcaaccgggtgcag
cgcgcggcggtcatcgccaacggcgagctgatcagcgcagaggagctgggcctgtgcggc
aaaccgcagccgcctgcgggtgacggcgcgctcgacaccgcccgcgagtccgccgaacgc
gagacaatcctggcctgcctgcgcgagagtggattcaacatcagcgaaaccgcacgccgg
ctgaaggtgtcccgggtgacggtgtatcgcctgtgccgcaagcacaagctggatctcgcg
caactgcgctga
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