Lysobacter avium: INQ42_03425
Help
Entry
INQ42_03425 CDS
T08144
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lavi
Lysobacter avium
Pathway
lavi01501
beta-Lactam resistance
lavi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
INQ42_03425
01503 Cationic antimicrobial peptide (CAMP) resistance
INQ42_03425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lavi02000
]
INQ42_03425
01504 Antimicrobial resistance genes [BR:
lavi01504
]
INQ42_03425
Transporters [BR:
lavi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
INQ42_03425
Antimicrobial resistance genes [BR:
lavi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
INQ42_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QOW22655
LinkDB
All DBs
Position
765887..769012
Genome browser
AA seq
1041 aa
AA seq
DB search
MSISDLAIRRPVFATVMSLLLMVIGVMTFSRLTLRELPAIDPPIVSVNVNYPGASAAVVE
TRITQALEDALSGIEGVETIQSRSVNGRSSVTLEFTLERDIEAAANDVRDAISSVASRLP
DEADAPQVRKADSDSDTLIWLNMSSTTMDALQLSDYAERYIVDRLSSLDGVSQVQIGGRQ
RYAMRIWLDRSAMAARGITATDIEAALRAENVELPAGRIESETRDFTLRVARQYEKPSDF
AEIPIREGSDGYVVRIGDVAQVELASAERRAYYKSNGQPNVGLGVVKTSTANALDVTRAA
RAEAVEIQKTLPEGTDIFVAYDSTVFIDESIRRVYHTLLEAMALVLLVIWLFLGSFRAAL
IPAVTVPVCLIAAFIPLYLFGYSINLLTLLALVLSIGLVVDDAIVVLENIQRRADLGEPP
LVAAVRGTKQVAFAVIATTTVLVAVFLPVGFMEGNTGRLFRELSVALAGAVALSAFVALT
LTPMMSSKLVRARTDERSNPIHRWSNRQLTRLSGAYQGWLGRHVGKRWLVGGLMLGALAL
SYGLIKLVPSELAPAEDRGSFFVSIVGPEGAGFDYTVGQLAQVEAVVAAHTGEDKAIRRY
NSRAPGGWGATEEMHTANVIVFLQDWDQRDMSTAEVADSLRADLGKLTGVQAQPRVGGGL
VGSRGQPIQLVLGGPEYAEIAQWRDMMMEKMEANPGLFSVDSDYKETRPQMRVEIDRKRA
SDLGVSVSDIGHALETMMGSRRVTTFVQDGEEYDVLVQAGRDGRASPADLSAIEVRGKDG
VLVPLSNLVTLSELAEAGSLNRFDRMRAITITAGLAPGYTMGEALEFLNQTVATTLPDYA
QVAWKGESREYQKAGGAVLLTFALALLVVFLVLAAQFESFIHPFVIMLTVPLAVLGALVG
LAVTGGTLNLFSQIGIVMLVGLAAKNGILIVEFANQLRDSGRTITEAIIESAGVRLRPIL
MTSIATAVGALPLVLAGGPGSASRATIGVVIMFGVSLSTLLSLFVVPAFYVVLAPFTRSP
HAVSQELDALAAKTPEVGGHA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccgatctggccatccgccgtccggtgttcgccaccgtgatgagcctgctg
ctgatggtgatcggagtgatgacgttctcgcgtctcaccctgcgcgagctgccggcgatc
gatccgccgatcgtctcggtcaacgtgaactaccccggcgcctcggcggcggtggtggag
acgcgtatcacccaggcgctggaagacgccctgtcgggcatcgagggcgtggagacgatc
cagtcgcgcagcgtcaacgggcgctcctcggtcaccctggagttcacgctggagcgcgac
atcgaggcggccgccaacgacgtgcgcgacgcgatcagcagtgtcgccagccggctgccc
gacgaggccgatgcgccccaggtgcgcaaggccgacagcgattcggacacgctgatctgg
ctcaacatgagctccaccacgatggacgcgctgcagctgtcggattacgcggagcgctac
atcgtcgaccggctgtcgagcctggacggcgtctcccaggtccagatcggcggccgtcag
cgctatgcgatgcggatctggctggacaggtcggcgatggccgcgcgcggcatcaccgcc
accgacatcgaagcggcgctgcgcgccgaaaacgtcgagctgccggcgggccggatcgag
tcggaaacccgcgatttcaccctgcgcgtggcgcgccagtacgagaagccttccgacttc
gccgagattcccatccgcgagggcagcgatggctacgtggtgcgcatcggtgatgttgcc
caggtcgaactggcctcggccgagcgccgcgcctactacaagagcaacggccagcccaac
gtcggtctgggcgtggtcaagacctcgaccgccaatgcgctggacgtgacccgcgccgca
cgagcagaggcggtcgagatccagaaaacgttgcccgagggcaccgacatcttcgtggcc
tacgactccacggtgttcatcgacgagtcgatccggcgcgtttaccacacgctgctggag
gcaatggcgctggtcctgctggtgatctggctgttcctgggcagcttccgtgccgcgctg
atcccggcggtcacggtgccggtgtgcctgattgcggccttcattccgctgtacctgttt
ggctattccatcaacctgttgaccctgctggcgctggtgctctcgatcgggctggtggtg
gacgatgccatcgtggtgctggagaacatccagcgccgcgccgacctcggtgagccgccg
ctggtcgctgcggtgcgcgggaccaagcaggtcgccttcgcggtgatcgcaaccacgacc
gtgctggtcgcggtgttcctgccagtgggcttcatggaaggcaataccgggcgcctgttc
cgcgagctttcggtggcgctggccggcgcggtggcgctgtcggcgttcgtcgccctgacg
ctgaccccgatgatgtcctccaagctggtgcgtgcgcgcaccgacgagcgttccaatccg
atccaccgctggagcaaccgccagctgacccgcctcagcggcgcctaccagggctggctg
ggccgacacgttggcaagcgctggctggttggaggcctgatgctcggtgcgctggcgctg
agctatggcctgatcaagctggtgccgtccgagctggccccggccgaggaccgtggctcg
ttcttcgtgtccatcgtcggcccggaaggtgcgggctttgactacaccgtcggccaactg
gcccaggtcgaggcggtggtcgccgcccacaccggcgaggacaaggcgatccggcgctac
aacagccgcgctcccggcggctggggcgcgaccgaggagatgcatacggccaacgtgatc
gtgttcctgcaggactgggaccagcgcgacatgagcacggccgaggtcgccgattcgctg
cgcgccgatctgggcaagctgaccggcgtgcaggcacagccgcgcgtgggcggcggcctg
gtcggcagccgtggccagcccatccagctcgtcctgggcggcccggaatatgcggaaatc
gcgcagtggcgcgacatgatgatggagaagatggaggccaatccgggcctgttctcggtg
gattcggactacaaggaaacccgcccgcagatgcgcgtggagatcgaccgcaaacgtgcg
tccgacctgggcgtcagcgtgtcggacatcggccatgcgcttgaaacgatgatgggcagc
cgccgggtgaccaccttcgtccaggacggcgaagagtacgacgtgctggtccaggcgggt
cgcgatgggcgggcctctcctgccgacctgtcggcgatcgaggtgcgcggcaaagacggc
gtgctggtgccgctgtccaacctggtgaccctgtcggagctggccgaggcaggcagcctc
aaccgcttcgaccgcatgcgtgcgatcacgatcaccgccgggctggcgccgggctacacg
atgggcgaggcgctggagttcctcaaccagaccgtcgccaccacgctgccggactatgcg
caggtcgcgtggaagggcgaatcgcgggagtaccagaaggccggcggcgcagtgctgctg
accttcgcgctggcgctgctggtggtgttcctggtgctggccgcgcagttcgagagcttc
atccatcccttcgtgatcatgctcaccgtgcccctggcggtgctgggcgcgctggtcggt
ttggcggtgacgggtggcacgctcaacctgttcagccagatcggcatcgtcatgctggtc
gggctggccgcgaagaacggcatcctgatcgtcgaattcgccaaccagttgcgcgactcg
gggcggacgatcaccgaggcgatcatcgagtcggcgggcgtgcgactgcgaccgatcctg
atgacatccatcgccaccgcggtgggcgcgttgccgctggtgctcgccggcggtcccggc
tcggccagccgggcgaccatcggcgtggtgatcatgtttggcgtgtcgctgtccacgctg
ctgtcgctgttcgtggtgccggcgttctatgtcgtgctcgcgccgttcacccgctcgccg
catgcggtatcgcaggaactggacgccctggcggcgaagacgccggaagtcggcggacac
gcctga
DBGET
integrated database retrieval system
