KEGG   Lysobacter avium: INQ42_05735
Entry
INQ42_05735       CDS       T08144                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
lavi  Lysobacter avium
Brite
KEGG Orthology (KO) [BR:lavi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lavi03400]
    INQ42_05735
Enzymes [BR:lavi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     INQ42_05735
    5.6.2.6  RNA 3'-5' helicase
     INQ42_05735
DNA repair and recombination proteins [BR:lavi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    INQ42_05735
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QOW23052
LinkDB
Position
1258857..1261412
AA seq 851 aa
MAVRQACCRGRPGRHLAGTGAVSDAPVRPRRRASDAALTDWFAARGWRPAPFQREAWRRY
LAGESGLLVTPTGSGKTLAALGGPLLQALALGDAPAKARRGVAAAPRLRLLWITPLRALA
ADTVRSMQEPIAALGVPWTVAMRTGDASARDKRLARKGLSDVLVTTPESFALMLSYPDAA
QLLAGVRGVVVDEWHELLGNKRGVLLQLCLARLRGIVPAAPVWGLSATLGNLEEARDVLL
PHRPDAPILQSARRRRMTLQTLLPNEGERFPWAGHLGLSQLARVAAVLQKARSSLLFTNT
RSQAELWHRALQSVWLDDPTTLALHHGSLDASLRKAAEAGLRDGTVRCVVATSSLDLGVD
FPAVDQVLQVGSPKGMARLWQRGGRARHRPGEAGKVICVPTHALELAEYAAARVALAHGR
VESRPPLRLSLDVLAQHCVTLALGGGFEPGQLLEEVRGTHAFAALREQAWTAVLDFIVRG
GSALESYPDYRRVIRDDDGCYRVHDRRVAFRHRLSIGTITSDGSVQVRYMKGGWLGSVEE
AFISRLRPRERFQFAGKTLELVQLRDMTAFVRIAKAGEGRVPRWQGGSMPLSSELGAEVE
AILHEPAESPEMRALQPLLDLQSRLSQLPGPDSLLVESIKTRQGWHLFVYPFAGRGVHEG
LAALLALRWGRETPNTFSWAVNDYGLVLTAQSEAWPDAPLMQRLLTPEGLLDDLLASLNI
AELARRQFREIARVAGLLPPSLPGRAARSLRQLQASSSLLFDVLRQHDPGHVLLAQAERE
VMEAQLDVQHLKAVLTRCGERPLALRRPRSLTPLGFPLWAEAIRGQLSTEDWRTRVKRAA
QQLEQRHAWNA
NT seq 2556 nt   +upstreamnt  +downstreamnt
atggcggtccgacaagcctgctgccgaggccgaccaggtcgacaccttgcgggcactggc
gcggtgagcgacgcgcccgtccgcccccggcggcgagccagtgacgcagcgctgaccgac
tggtttgcagcgcgcggatggcgtccagcacctttccagcgcgaggcctggcgacgctac
ctggccggcgagtccggcctgctggtgacgccgaccgggagtggcaagacgctcgccgct
ctgggcggcccgctgctgcaggcactggcgctgggcgatgcgccggcgaaagcgaggcgc
ggtgtcgctgccgcgccgcgcctgcgcctgctgtggatcaccccgttgcgcgcgctggcc
gccgataccgtgcgctcgatgcaggaaccgatcgctgccctcggtgttccctggacggtc
gcgatgcgcaccggcgacgccagcgcacgcgacaagcgcctcgcccgcaaaggcctgtcg
gacgtgctggtcaccacgcccgagtcgttcgcactgatgctgtcctaccccgacgccgcg
caactgctcgccggcgtacgcggggtggtggtcgatgaatggcatgagctgttgggcaac
aaacgcggggtgctgttgcagttgtgtctcgcgcggctgcgcggcatcgtgccggccgcg
cccgtctggggtctgtcggccactctgggcaatctggaggaggcgcgcgatgtgctgctg
ccgcatcggcccgacgcgccgatcctgcagtctgcgcgccgccggcggatgaccttgcag
accctgctgcccaacgaaggcgagcgctttccctgggccgggcatcttggcctgtcgcag
ctggcgcgcgtcgccgcggtgctgcagaaggcgcggtccagcctgttgttcaccaacacc
cgctcgcaggcggagctgtggcaccgggcgctgcaatcggtctggctggacgacccgacc
accctcgcgctgcaccatggatcgcttgacgcctcgctacgcaaggccgccgaggccggc
ctgcgtgatggcaccgtccgctgcgtggttgcgacctcaagcctcgacctgggcgtggat
tttcccgcggtcgatcaggtgctgcaggtcggaagcccgaaggggatggccaggttgtgg
caacgcggcgggcgcgcgcgccatcgtcccggcgaggcggggaaggtgatctgcgtgccg
acgcatgcgctggagctggcggagtacgccgccgcccgcgtggcgctcgcccacgggcgg
gtcgagtcgcggccccccttgcggctgtcgctggacgtgctcgcgcagcactgcgtcacc
ctcgcgctgggcggcggcttcgaacctgggcaattgctggaagaggtccgcggcacccac
gcattcgcggcattgcgcgagcaagcgtggaccgcggtgctcgacttcatcgtccgcggc
ggcagcgcgttggaaagctaccccgactaccgccgcgtcatccgcgacgatgacggctgc
tatcgcgtccacgaccgccgcgtggcgttccggcaccggctgtcgatcggcaccatcacc
agcgacggcagcgtgcaggtgcgttacatgaaaggcggctggctcggctcggtggaggag
gcgttcatcagccggctgcgcccgcgcgagcgcttccagttcgccggcaagacactggag
ctggtccagctgcgcgacatgaccgcgtttgtgcgcatcgccaaggccggtgagggcagg
gtgccgcgctggcagggtgggagcatgccgctgtccagcgagttgggtgccgaggtcgag
gccatcctgcacgagccggccgaaagcccggagatgcgcgcgctgcaaccactgctcgac
ctgcagtcccggctttcgcagttgccggggcccgacagcctgctggtcgagtcgatcaag
acacgccagggctggcacctgttcgtctatccgttcgccggacgcggcgtacacgaggga
ttggccgcattgctggcgctgcgctgggggcgcgaaaccccgaacaccttcagctgggcg
gtaaacgactatgggctggtgctgactgcacagtccgaggcgtggccggacgcgccgctc
atgcagcgcctgctgacgccggagggcttgctggatgatctgctggcgagcctcaatatt
gcggaactggcgcgtcggcaattccgcgagattgcccgggtggcgggcctgctgccgccg
tccctgccggggcgtgcggcccggtcgctgcggcaactgcaggcctcaagcagcctgctg
tttgacgtcttgcgccagcatgatccgggccacgtgctgctggcccaggctgagcgcgag
gtgatggaggcgcaactcgacgtccagcaccttaaggctgtcctgacccgatgcggtgaa
cgcccgctggcattgcggcgtccgcgcagcctgacgccgctcgggttcccgctatgggcc
gaggccatccgcggccagctcagcaccgaggactggcgcacccgtgtgaagcgcgccgcg
cagcagctggagcagcgccatgcctggaatgcttga

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