Lysobacter avium: INQ42_07325
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Entry
INQ42_07325 CDS
T08144
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lavi
Lysobacter avium
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_07325 (sbcD)
DNA repair and recombination proteins [BR:
lavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
INQ42_07325 (sbcD)
Archaeal homologous recombinant proteins
INQ42_07325 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QOW21108
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Position
complement(1621127..1622353)
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AA seq
408 aa
AA seq
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MRLLHTSDLHLGQNFLGQSREAEHAAFLDWLVVQVQEHRVDAVLVAGDVFDTGTPPSYAR
EQYNRFIVGIRDAGARLIVLGGNHDSPAMLAESRGLLARLDTLVVPTLMQSPEEHVYRIP
GRDGGPGMILCAVPFIRSRDVSRSEAGQSAEDKRGAMMDGIASHYARIHEAAVAIRDAAG
EPLPIVASGHLTTVGASTSDSVREIYVGSLNAFPTSAFPPAAYIALGHIHQPQKVGGLDH
IRYSGSPIPLSFDEIGQAKQVLLVELRGEQLHEVTPLPVPRFRVLGRVAGTLARLPPQLA
AIAAEVPDGGLGWVEVMVEADDYLPDLQNRVAELVEALPLEVLRIRRKRSLAGAVIDAAD
GQHLDELQPREVFAQRLAQEQDLSDVRIERLHACFDEVLADIEGGEPA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgctgcacacctccgatctccatctgggccagaactttctcggccaatcgcgc
gaagccgagcatgcggcgttcctggactggctggtcgtgcaggtgcaggagcatcgcgtg
gatgcggtgttggtcgccggtgatgtgttcgataccggcacgccgcccagctacgcgcgc
gagcagtacaaccgcttcattgtcggcatccgtgatgcgggcgcgcgactgatcgtgctg
ggcggcaatcacgactcaccggcgatgctggccgaatcgcgcggcctgctggcgcggctg
gacacgctggtggtgccaacgctgatgcagtcgccggaggagcacgtgtaccggatcccg
ggccgcgatggcggtccggggatgatcctgtgcgcggtgcccttcatccgctcgcgcgat
gtctcccgcagcgaggccgggcagagcgccgaggacaagcgcggcgcgatgatggacggc
atcgcctcccactacgcgcgcatccacgaggccgccgtcgccatacgcgacgccgccggc
gagcctctgccgatcgtcgccagcggccacctgaccaccgtgggcgccagcaccagcgac
tcggtgcgcgagatctatgtcggctcgctcaacgcctttcccaccagtgcgtttccgccg
gcggcctacatcgcgctggggcatatccaccagccgcagaaggtcggcgggctggaccac
atccgctacagcggctcgccgattccgctcagctttgacgagatcggccaggccaagcag
gtgttgctggtcgagctgcggggcgagcagttgcatgaggtcacaccattgccggtgccg
cgcttccgcgtgctggggcgggtggccggcacgctcgcccgcctgccgccgcaactggcc
gccatcgccgccgaagtgccggacggcgggctcggctgggtcgaggtcatggtcgaggcg
gatgactacctgcccgacctgcagaaccgggtcgccgagctggtcgaagcgctgccgctg
gaggtgttgcgcatccgccgcaagcgcagcctcgccggcgcggtgatcgatgccgccgac
ggccagcacctggatgaactgcagccgcgtgaggtgttcgcccagcgcctggcccaggaa
caggacctgtcggacgtgcggattgaacggctgcacgcgtgtttcgatgaggtgctggcc
gacatcgaaggcggggagccggcatga
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