Lactobacillus sp. wkB8: LACWKB8_0006
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Entry
LACWKB8_0006 CDS
T03355
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
law
Lactobacillus sp. wkB8
Brite
KEGG Orthology (KO) [BR:
law00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
law03032
]
LACWKB8_0006
03400 DNA repair and recombination proteins [BR:
law03400
]
LACWKB8_0006
Enzymes [BR:
law01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LACWKB8_0006
DNA replication proteins [BR:
law03032
]
Prokaryotic type
DNA Topoisomerases
LACWKB8_0006
DNA repair and recombination proteins [BR:
law03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LACWKB8_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIS08329
LinkDB
All DBs
Position
6803..9289
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AA seq
828 aa
AA seq
DB search
MDNDNQGQDHRIRNVDLTSVMNSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELG
VTPDKPYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDE
PAAMRYTEARMSKIAVEMLRDINKNTVNWQRNYDDSENEPVVLPARIPNLLVNGTSGIAV
GMTTNIPPHNLSEVIKGLHMLMNNPAITTKELMKAIPGPDFPTGGTIMGRGGIYRAYETG
RGNIVVRANTNIETEKSGRERIVVTEIPYLVNKAELVKKIADLARAKTIDGITGVRDESD
QTGMRITIDIRRDASASVVLNNLFKLTQMQANFGMNMVAIVDGAPHFLSLKQMLQYYLEH
QEDVVTRRTKFELAKAEARAHILEGLQIALDHIDEIVHIIRQSQSSDIAKAALISRFGLD
DKQSQAILDMRLVRLTGLERDKVEAEYKELQAKIADYKDILAKPERINEIIYNELLDIQK
RFGDDRRTKIGASEVVSIEDEDLIEKQDVLLTLTHSGYIKRMPITEFKTQNRGGKGIKGM
GVKDGDFIANLIYSSTHDMLLFFTNKGKVYSKKAYEIPEFGRTAKGLPIVNLLQLEKGEK
IQTIVNIPEDADDQYLFFITKMGTVKRTHVSEFGNIRNSGLIALTLRDGDELNNVLATDG
KQDILIGTHLGYAVRFNEQTVRSMGRTAAGVRGINLRENDYVVGSGVIKNSDEVLVISEK
GYGKRTAAAEYPTKGRGGKGIKTANITEKNGPLSGVTVIDGSQDIMVITDDGIMIRFKTK
DVSQTGRSTLGVRLIKVNDNNKVASLAVVPAEEDQEVAAAEETDSEQD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacaatcaaggtcaagatcacagaataagaaacgttgatttgaccagcgta
atgaatagttcattcttggattatgccatgtccgttatcgtcgcacgggctttacccgat
gtgcgtgatggcttaaagccggttcaacgccggattttatatggtatgagtgaactaggt
gttacaccagataaaccatacaagaagtctgccagaattgtaggggaggttatgggtaaa
ttccaccctcacggtgattcctcaatttatttggcaatggctcatatggcccaagatttc
agctaccgctatatgctcgttgacggacacggcaattttggttcagttgatggtgatgag
cccgccgcaatgcgttacactgaggcgcgcatgagcaaaatagccgttgaaatgctgagg
gatatcaataaaaacactgttaattggcaacgcaattatgatgattctgaaaatgaaccg
gtggtattgccggctagaataccaaatcttttggttaacggtactagcggtattgcggtt
ggtatgactaccaatattccgccacacaacctttcagaagtgattaagggactgcacatg
ttaatgaataatcccgctatcactactaaagaactgatgaaggcaatcccaggtcctgat
tttcctacaggcggaacaatcatgggtcgcggcggcatttatcgcgcctatgaaactggt
cgtggcaatattgtcgttcgtgctaataccaatattgaaactgaaaaaagtggccgtgaa
agaatagtcgtcactgaaataccatacttggttaataaagcagaactggttaagaaaatt
gctgatttagcgcgtgctaaaacaattgatggtattactggtgtgcgtgatgaatcagat
caaacggggatgagaattaccattgatatccgccgtgatgccagcgctagtgtggtttta
aataacttgtttaaactgacgcaaatgcaagctaactttggcatgaatatggtagcaatc
gtcgatggtgcaccgcactttttaagcctcaagcagatgctgcaatattacttggaacac
caagaagatgttgttacccgtagaactaaatttgaattagccaaagccgaagctagagca
cacattcttgaaggtctccaaattgcccttgatcatattgacgaaatcgtccacatcatt
cggcagagtcaatcaagcgatattgctaaagctgccttaatcagtcgttttggtcttgat
gacaagcagtcacaagccattttagatatgcgcttggtacggttaacaggtcttgagcgt
gacaaggttgaagctgaatataaggaattacaagctaaaattgccgactataaagatatt
ttggcaaagccggagcgcattaatgaaataatctacaatgaattgctggatattcaaaag
cgctttggtgatgatcggcggactaagattggtgccagtgaagttgtttcaattgaagat
gaagatttaattgaaaaacaagatgttttactaaccttaactcatagtggctacattaag
cggatgccaattactgaatttaagactcaaaatcgtggtggtaaaggtattaaaggtatg
ggcgttaaagatggcgacttcattgccaacctcatttactcaagcacgcatgatatgcta
ctgttctttaccaacaagggcaaggtttattcaaagaaagcctatgaaattccggaattt
ggccgtacagccaagggtctcccaatagtcaacttattgcaactggaaaagggcgaaaaa
atccaaacgattgttaatattcctgaagatgcggatgaccaatacttattcttcattaca
aagatggggacggtcaaacggacacatgtcagtgaatttggcaatatccgtaacagcggt
ttaattgctttaaccttgcgtgatggcgatgagttgaataatgtcttagctactgatggc
aaacaagatattttaatcggtactcacttaggttacgccgtacgctttaatgagcagaca
gttcgttcaatgggccggacagcagctggcgttcgcggaattaatttacgcgaaaatgac
tatgtggttggctctggcgtcattaagaatagcgatgaagtgctagtcatttcagaaaag
ggttacggcaagagaacagcagctgccgaatacccaactaaaggtcgcggcggaaaaggt
attaaaaccgcaaatattaccgagaaaaatggtccactctctggtgtgacagtgatcgat
ggcagccaggatatcatggtgattactgatgatggtatcatgatccgctttaagacaaag
gatgtttctcaaaccgggcgcagcactttgggtgttcgcttgatcaaagttaatgacaac
aataaagttgccagtcttgcggtagttcctgccgaagaagatcaagaagttgctgcagcc
gaagaaactgacagtgagcaggattaa
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