Leclercia adecarboxylata: APT61_08705
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Entry
APT61_08705 CDS
T04232
Symbol
yebU
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
lax
Leclercia adecarboxylata
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lax03009
]
APT61_08705 (yebU)
Enzymes [BR:
lax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
APT61_08705 (yebU)
Ribosome biogenesis [BR:
lax03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
APT61_08705 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
Methyltransf_25
PCMT
Ubie_methyltran
TRM
Motif
Other DBs
NCBI-ProteinID:
ALZ96080
LinkDB
All DBs
Position
complement(1868198..1869640)
Genome browser
AA seq
480 aa
AA seq
DB search
MSQRPVYLPDEFLAQMRQALPDPLALDAFIAACQRPLRRSLRVNTLKISVADFLTLVAPY
GWQLTPVPWCEEGFWIERDDEEALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNTPDR
VMDVAAAPGSKTTQIAARMDNQGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF
GAALPEAFDAILLDAPCSGEGVVRKDPDALKNWSVASNLEIAATQRELIDSAFHALRPGG
TLVYSTCTLNRDENETVCLWLQAQYPDAVEFLPLNDLFPSASECVTPEGFLHVFPHIYDC
EGFFVARLRKTSAIESLPAPTFKVGNFPFTPLKTREAAQITAAANLAGLQWGDHLRLWQR
DKEVWLFPTEIEPLIGKVRFSRVGIRLAETHNKGYRWQHEAVIALAGQDNTFALTQQEAE
EWYRGRDVYPQTSPAGDDAVVTYQGFPIGLAKKVGSRLKNSYPRELVRDGRLFTGNVDAS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcaacgtcccgtctatctgccagatgaatttctggcgcaaatgcgccaggctctg
cctgaccctctcgctctcgatgcttttatcgcggcttgtcagcgcccgctgcgccgcagc
ctgcgcgtcaataccctgaaaatcagcgtcgcggatttcctcacgcttgttgccccctac
ggctggcaactcaccccggttccgtggtgcgaagaggggttctggatcgaacgtgacgac
gaagaagctctgccgctgggcagcaccgccgagcacctgagtgggctgttttacattcag
gaagccagctccatgctgccggttgccgcgctctttgccgacggcaatacgcctgaccgc
gtgatggacgttgcagcagcccccgggtccaagaccacccaaatcgccgcgcggatggat
aatcagggcgcgatcctcgccaatgaattttccgccagccgcgtcaaagtgctgcatgcc
aacatcagccgctgcgggatcagcaacgttgctttaacccattttgatggccgcgtgttt
ggagccgccctgccggaagcctttgatgcgatcctgttggatgccccctgctccggcgaa
ggggtggtgcgcaaagatcccgacgcactaaagaactggtccgtcgccagcaatctggaa
attgcggccactcagcgtgagctaatcgacagcgctttccatgccctgcgccccggcggc
accctggtgtactccacttgcaccctgaaccgcgacgagaacgaaaccgtctgcctgtgg
ttacaagcgcaatatcccgacgccgtggagttcctgccgctgaacgatctgttccccagc
gccagtgaatgcgtgaccccagaagggttcctgcacgtcttcccgcatatctacgactgc
gaaggtttcttcgtggcgcggctgcgcaaaacctccgctatcgagtcgctcccggcgccg
acattcaaggtgggtaatttccccttcacgccgcttaaaacccgcgaagccgcgcagatt
accgctgcggcaaatctggcgggcctgcaatggggagatcacctgcgcctgtggcagcgc
gataaagaggtgtggttgttcccgacggaaatagaaccgttaatcggtaaagtgcgcttc
tctcgtgtcggcatccgtctggccgaaactcataacaaaggttaccgctggcagcatgaa
gcggtgatcgcgctggcaggtcaggacaacacgtttgccttaacccagcaggaagcggaa
gagtggtaccgcggccgtgatgtctatccccagacgagtcctgccggggatgatgcggtg
gtgacgtatcaaggtttccctattgggctggcgaaaaaagtgggttcacgcctgaaaaat
agctacccgcgcgagctggttcgcgatggtcgcttgtttaccggtaacgtcgacgcgagt
taa
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