Lactobacillus amylovorus GRL1118: LAB52_05940
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Entry
LAB52_05940 CDS
T01954
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lay
Lactobacillus amylovorus GRL1118
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_05940
Enzymes [BR:
lay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAB52_05940
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LAB52_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
DEAD
PDDEXK_1
ResIII
AAA_16
Herpes_ori_bp
AAA_30
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AEA32125
LinkDB
All DBs
Position
complement(1164461..1168081)
Genome browser
AA seq
1206 aa
AA seq
DB search
MPQFTKEQEKAINDRGHDILVSASAGSGKTTVLVERVLREILAGTQVSELLVVTFTKAAA
EEMKTRIKNALTQEMAKPGVNRRYLREQLNQVDTANISTIDAFCLEVIHRFYYSVDLDPS
FQILTDETQAALLKERALREVEGEFLTNKDSDFRRFYDNFAGDRDADSPRDLLLDLYNYA
MAKPEYHAWLMQLPEVYETGAEITQSNLWQNQIKPYLLDSFKGLENKINGRLEETIFETK
ELKKVREDFSLFDQNLQNFLAALDEDKPYDEQRDLLRLCTFNGRYRKSSKWDEDLLEFYG
DLQKLKDEAKSQVFDTFTAFFATDEKEQVKVMQDGQKIVAAIAQAEIALIERFNKLKRDE
DLIDYSDMEQLAYRILSQDTSSSQMARDFYQSKFKEILVDEYQDINALQENIIQQVRQPG
KNTLFMVGDVKQSIYGFRQAEPSLFLRKYHDFAQEQNEHEERILLSDNFRSTEPVTRTVN
HLFNSILSSNFGGIDYQKEGQLVFGAKYYPSNLPKASEVIIHKKERGGDENSDKVDFSEI
QMVLARIKQLKEEHMQVFDSKSGQMREMKYSDIAILTRSHSDNLEIMQEFAKQDIPLFVT
DAENYFQTFELTVIMNYLKIIDNPDQDIPLVTVLRSPLFNFGEKDLAKIRIKSKNSSFYS
ALTSYVGVGDQLSDKCKDFLNQLASLREFATTHRISELIWSIYTRTNLLEIMTALPNGEQ
RRVNLEALYERATSYESAGFKGLYQFINFINRMRQSQKDLAQPLLTKEAGNAVRLMTIHG
SKGLEFPIVFYLGMHHQYQLRDLKGNYVINADGLGVTLREEHYRIDSLVKAMGNITKKRQ
LLEEEARILYVALTRAKQKLIMVGDIPSFDKKVKDWSNELDHEGQLSLADKLAATTPLSF
MGPALAFDRRVAIRISDITNSLDQSQPILFVDFSDDDAIANNAVNEEKGTRKDSEPEIKT
LTETATKLYQFDYPFKDAIATTAYQAVSEIKKAFNDPDEAELENSHLLASTNRYLQPIDT
KPSFLYQTKFTGAEIGTATHLILQYYDYTGDGSDEQLEQEIQHLIEQKKLNADIVSSLKK
DQIEWFVHSDFAKDFWQRPEDLKREVDFSSLLSARTLFDDFSDPNAKILVHGTIDGYFII
NNGIILFDYKTDHVDKSHLDEAIELIKEKYTGQLRLYERALNEFSTKKVIGKYLILLDAK
QAVEVK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
ttgccacaatttactaaagagcaagaaaaagcgatcaatgatcgtggacacgatatttta
gtttcagcttcggctggtagtggtaaaactacagtcttggttgaacgggttttgagagaa
attttggcaggaacgcaagtaagtgaactgttggttgtgacatttactaaagcagctgca
gaagaaatgaaaacgagaataaagaatgccttgacgcaagaaatggctaagccaggcgtc
aatcggagatacttgcgagaacaactgaatcaagtggatactgccaatatctcaactatt
gatgctttttgtcttgaagtaattcatcgtttctattattcagtagatttagatcctagt
tttcagattctaaccgacgaaacgcaggcagctttattaaaagaacgtgctttgcgagaa
gttgaaggtgaatttttaactaataaggattctgactttagacgtttttatgataatttt
gctggtgaccgggatgctgacagtccgcgagatttgttattagatttgtataactatgcg
atggctaagccagaatatcatgcctggttaatgcaattgccagaggtgtatgaaactgga
gctgagattactcagtctaatttatggcaaaaccaaattaagccatacttattagatagt
tttaagggcctagaaaataaaatcaatgggcgcttagaagagactatctttgaaaccaag
gaactaaaaaaagtcagagaagacttcagtttgtttgatcaaaacttacagaacttcttg
gcggccttggatgaggataaaccatatgatgagcaaagagatttactgcgtttgtgtact
tttaatggtagataccgcaagtcgagtaaatgggatgaagatctgctagagttctacggt
gatttgcaaaagttaaaagatgaagccaaaagtcaggtctttgatacctttacggcattt
tttgccaccgatgaaaaagaacaagtaaaggtaatgcaagatggtcaaaagatcgtagct
gcgattgcgcaagctgaaatcgccctaattgagcgttttaacaagttaaagcgcgatgag
gacctgattgattatagtgatatggagcaattagcctatcgcattctcagtcaggatacg
tctagctcacagatggctagagatttttatcaaagtaagtttaaagaaattctggttgac
gagtatcaggatattaatgctctgcaggaaaatattattcaacaggttagacaaccaggg
aagaataccttgttcatggtaggggatgtgaagcagtcgatttatggctttagacaagct
gaacctagtttgttcttaagaaagtatcatgattttgctcaagaacaaaacgaacatgaa
gaacgtattttgctttcggataattttagatcaaccgagcctgtaactcgtactgtcaat
catctgtttaatagtattttgagttctaattttggtggaattgattatcaaaaagaaggg
caattggtttttggtgccaaatattatccaagcaatttgcctaaggctagtgaggtaatc
attcataaaaaagaaagaggtggagacgaaaacagcgataaggtcgatttttcagaaatc
caaatggttttagcacgaattaagcagctaaaagaagagcacatgcaggtattcgatagt
aaaagcggacaaatgcgtgagatgaagtacagtgatattgctattttgactagaagtcat
agtgataatctggagatcatgcaggaatttgccaaacaagatatccccttgtttgtgact
gatgccgagaattattttcaaactttcgaattaactgtcattatgaattatctgaaaatt
atcgataatcctgatcaggacattcctctggttacggttttgcgttcaccactctttaat
ttcggtgaaaaagacttggctaagattagaattaagagtaaaaacagcagtttttatagt
gcccttacttcatatgttggtgtgggagatcagctcagcgataaatgcaaagactttttg
aatcaattggcatcgctgcgtgagtttgcgactacgcacagaatttctgaattaatttgg
agtatttatacacgaaccaatctgttagaaatcatgactgctttgcctaatggtgagcag
cgtcgggtcaatttggaagcactttatgagagagctacttcttatgaaagtgctggcttt
aaaggattatatcaattcatcaactttattaatcgcatgcgtcaaagtcaaaaggattta
gctcaaccgcttttaactaaagaggcgggaaatgcagtaagattgatgactatccacggt
tctaaggggctggaatttccaattgtcttttatttagggatgcatcatcagtatcagttg
cgcgatttaaagggtaactatgtcattaatgctgatggtttaggtgttactttaagagag
gagcattatcgaattgactccttagttaaggcaatgggtaatattactaagaaaagacaa
ttgcttgaagaagaagctcgtattctctatgtagctttaacgcgggctaagcaaaagtta
attatggttggtgatattcctagttttgataaaaaggtcaaagactggtctaacgagttg
gatcatgaaggtcagttatcattggcagataaattagctgcaacaacaccattaagcttt
atgggccccgcattagcttttgatcgtcgtgtagcaatcagaattagtgatattacgaat
tcgcttgatcagagtcagccaattctcttcgtagatttttcagatgatgatgcaattgca
aataatgctgtcaatgaagaaaagggaactcgtaaagatagcgagccagaaattaaaaca
ctgacagaaactgctactaagctttatcaatttgactatccttttaaagatgcgattgca
actactgcttaccaggctgtttctgaaattaaaaaggccttcaatgacccagatgaagca
gagctggagaattcgcatttgctggcctcaactaaccggtatttgcagccgatcgatacg
aaaccaagtttcctctatcaaactaagtttaccggggcggagatcggtactgctacacac
ttgattttgcaatactatgattatactggtgacggaagtgatgaacagcttgagcaagag
attcagcatttaattgaacagaaaaaattgaatgcggacattgtttcgagtcttaaaaaa
gatcaaattgaatggtttgtccatagtgattttgctaaagatttttggcaaagaccagaa
gatttaaaaagagaagttgatttctctagtttgctgtctgccagaaccttgtttgatgat
tttagtgatccaaatgcaaaaattttggttcatggtacgattgatggctattttattata
aataatggtattattttgtttgactacaaaactgatcatgtagacaaatcgcatttagat
gaagcaatagaattaattaaagaaaaatataccggacagcttcgtttatatgaacgagca
ttaaatgaatttagtactaagaaagtaattggaaagtatttaattttgcttgatgctaaa
caagcagtagaagttaagtaa
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