Lycium barbarum (goji berry): 132600477 Help Entry 132600477         CDS       T09483                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism lbb  Lycium barbarum (goji berry) Pathway lbb03030   DNA replication lbb03410   Base excision repair lbb03420   Nucleotide excision repair lbb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lbb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     132600477    03410 Base excision repair     132600477    03420 Nucleotide excision repair     132600477    03430 Mismatch repair     132600477  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lbb03032]     132600477    03400 DNA repair and recombination proteins [BR:lbb03400]     132600477 Enzymes [BR:lbb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      132600477     6.5.1.6  DNA ligase (ATP or NAD+)      132600477     6.5.1.7  DNA ligase (ATP, ADP or GTP)      132600477 DNA replication proteins [BR:lbb03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     132600477  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      132600477 DNA repair and recombination proteins [BR:lbb03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      132600477    NER (nucleotide excision repair)     Other NER factors      132600477    MMR (mismatch excision repair)     Other MMR factors      132600477 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  132600477 NCBI-ProteinID:  XP_060169656 LinkDB All DBs Position 6:complement(3066748..3078312) Genome browser AA seq 840 aa AA seqDB search MLSLRSCCYSFKQPSFYNHLKFSLKPSSIFLIISPNKTLNKPLFLNPNSRTMSTKRSAFD VLMANSKKKTPTQDSSPKKRKTPSLETSSKTPQDSILKPIEDTNLVNGSKSKTTDVETSS KTPQNSVSKPIDDTHLVNSSKSEELVKKGKTPNLETSSKTPIDSQDSVLKPIEDTHLVNK SKSEELGVVKKRKMISPDESILEIKKKPANFDPRKAAYWGDGERVPFMFVAKALDAISKE SGRIVITEIVTNMLRTVIQTTPEDLLPVVYLSANKIAAAHDGMELGLGDASIIKALAEAC GAKEAHIKKQYKELGDLGLVAKASRSSQPLMRKPEALTVAKVFETFRIIAKESGKDSQEK KKNYIKSLLVAATDCEPQYLIRLLQTKLRIGLAEQTILVAIAHAFVYSDKHSSPPAGVDS PLEEAAKIVKQVFSVIPVYEKIIPALLADGVWKLQETCSFSPGVPVGPMLAKPTKGVSEI LDKFQDMEFTCEYKYDGERAQIHYMEDGSVEIYSRNAERNTGKFPDVVAAISRLKKPSAT SFVLDCELVAYDREKQKILPFQILSTRARKNVVVSEIKVNVCIYAFDILYLNGQPLLQEQ LNVRREHLYKSFEEEPGYFQYATAVTSNDLEEITKFLEDAVSGSCEGLIIKTLTKDATYE PSKRSNNWLKLKKDYMESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC KIGTGFSEAMLEERSSSLRSKVIPKPKSYYRYAETINPDVWFEATEVWEVKAADLTISPV HRAAQGIVDPGKGISLRFPRLMRVREDKNPEQASSAEMVADMYNAQKHNHKNDQDDNDED NT seq 2523 nt NT seq  +upstreamnt  +downstreamnt atgttgtctttgcgttcatgttgctactctttcaaacaaccctcattttacaaccatctc aaattttcccttaaaccctcttcaatctttctcatcatctctcctaataaaaccctcaat aaaccccttttcttaaaccctaattcaagaaccatgtccactaaacgctctgcatttgat gtccttatggcaaattccaagaaaaaaacaccaacccaagattcctcacctaaaaagagg aaaaccccaagtcttgaaacttcaagtaaaactccacaagattcaattttgaagccaatt gaggacaccaatttggtcaatgggtcgaaaagtaaaaccacagatgttgaaacttcaagt aaaaccccacaaaattcagtttcgaagccaattgatgacacccatttggtgaattcgtcg aaaagtgaagagttggtgaagaaaggtaaaaccccaaatcttgaaacttctagtaaaaca cctatagatagtcaagattcagttttgaagccgattgaggacacccatttggtaaataag tcgaaaagtgaagagcttggtgtggtgaagaaaaggaaaatgataagtccagatgagagt attcttgaaatcaagaaaaaacctgcgaatttcgatccaagaaaggcggcgtattggggt gatggtgagagagtgccgtttatgtttgtagctaaggcgttagacgcgatttcaaaggag tcaggaaggattgtgattactgaaattgtgactaatatgttgaggactgttattcagaca acgcctgaggatttgttgcccgttgtatacctttctgctaataaaattgcagctgcgcac gatggtatggagctcggtcttggagatgcttccattattaaggcacttgctgaagcttgt ggtgctaaagaagcacatatcaagaagcaatacaaggagcttggagacttgggacttgtt gctaaagcaagccgttcatcacagcctctgatgcgtaaaccagaagcactgactgttgcc aaagtttttgagacatttcggattattgcgaaggaatctggaaaggatagtcaggaaaag aaaaagaattacattaaatcactgcttgttgcagctactgattgtgaaccccaatatttg attcgtctcctccagacaaagctacgcattggtttggctgaacaaacaatcttagttgca attgctcatgcgtttgtgtactcagataagcattcgtcacctcctgcaggtgtagattct cctttggaagaggctgccaagattgtaaagcaagtgttctctgtaattccggtttatgag aaaattatccctgctcttctagctgatggtgtttggaagcttcaagaaacatgcagtttc tcacctggtgttccggttggacctatgctagctaagccaaccaaaggagtttctgaaatt cttgataagtttcaggatatggagtttacatgtgaatacaagtatgatggtgaacgtgct cagatacactacatggaagatggttccgttgagatatacagccgaaatgcagaaagaaat acaggaaagtttcccgacgttgttgctgctatctcaagattgaagaaaccttctgcaaca tcatttgttcttgactgtgaactggttgcatacgaccgtgagaaacagaagatcctgccc tttcagatccttagtacccgtgctcgtaagaatgttgttgtgagtgaaatcaaggtcaat gtgtgcatatatgcttttgatatcttgtatcttaatggacaaccacttcttcaagagcaa cttaatgtccgcagagagcatctttacaagtcatttgaagaagaacccggatatttccag tatgctacagctgtaacctcaaacgatctcgaggaaataacgaaatttcttgaagatgcg gtcagtggcagttgtgagggattgattatcaaaacactaactaaagatgctacatatgag ccttcaaagcggtcaaataactggctaaaactgaagaaggactacatggagagtattggc gactcactggatttggtaccaattgctgcttttcatggtcgggggaaacgtactggtgtt tatggagcttttctccttgcttgttatgatagcaacaacgaggagttccagagcatctgt aaaattggaactgggttttctgaagcaatgcttgaagaacgctcttcgagccttcgttcc aaagttattcctaaaccaaagtcatattacaggtatgcggaaaccatcaatccagatgta tggtttgaagctaccgaggtatgggaagtgaaagccgctgatcttaccatcagccctgtc caccgtgctgcccaaggtatcgtggatcccgggaagggaatttctttaagatttccacgt ttgatgcgtgtacgagaggacaagaatccggagcaggcctcatcagctgagatggttgcg gatatgtataacgctcaaaagcataatcataaaaatgatcaggatgacaatgatgaagac taa

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