Lycium barbarum (goji berry): 132604090
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Entry
132604090 CDS
T09483
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHG1A
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132604090
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132604090
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132604090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-Nse
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
132604090
NCBI-ProteinID:
XP_060173405
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All DBs
Position
7:122497534..122503609
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AA seq
655 aa
AA seq
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MQGQRSGIGALRETLGLSSDGGVDQQICWNNLQNPAQTNLPDYMVSSNETNSPFFNPMSQ
ERQNATGWSLGESSSSIAPNYASRSERKTDHGWSSTMTAYPGSSDILSLSNIEENLNSNR
VDNNSLFSQGSSSSTMPHDINRNPVFEGQNDNNDDDVDDCQVMECTPCISDRPGQERMSS
ARPSGTNGYLMDDNDGRPESSLDGRRFCKRKTLEGYLAQPSGSGSSDHIPLAENSLWHSV
PAPHSMSIDTNISAPTETPLDTPASRSAESSHRNFRVRINDSLQQDYLPSNLFPAVDDVG
NVNLSSEQQFPELLPNIPLDLRSVSAADSGNTQSHPVVTHVPSLHRRAHARWNSASSSRT
GSSSSFARERNSAIFEEPNSRNISQHPMFIPSTDGRNLNQNPDNSNLSGRNISVAGNVAS
SSTRVLHRSPQYHRRLSELVRRSLLSSAGSGSGGHNGNSRPLRLSSSVSQEMALSGNHEH
RTSSSRSAMMSERHLDSWRSLAGAREGRSRLVTEIRNVLDLMRRGEDLSVEDVMILDQSV
FFGMPDIHDHHRDMRLDVDNMTYEELLALEERIGDVCTGLSEEAISSHLKQRNYICIKTE
EPEDAEPCCICREEYNDGDDLGTLECGHDFHKDCIKQWLMQKNLCPVCKTTGLTT
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggcaaaggagtggcatcggtgctctgcgggaaactttaggtttgtctagtgat
ggtggtgtagatcagcagatatgttggaataatttgcaaaatcctgcacaaactaacctg
ccagattatatggtttcttctaatgagaccaatagtccattcttcaatcctatgagccaa
gaaagacagaatgcaaccggatggagtttaggagaatccagctcctctattgcaccgaat
tatgcaagtcggagcgaacggaaaacagatcatggatggtcatccacaatgactgcttat
cctggatcttctgatattctgtcactgagtaatatcgaagaaaatttaaatagcaatcga
gtagataacaacagtttattttctcaaggttctagttctagcaccatgcctcatgatatc
aacagaaatccagtctttgaggggcagaacgacaataatgacgatgatgttgatgactgt
caagtaatggagtgtactccatgcatatcagatagaccaggacaagagcggatgtcatct
gctagaccttctggaactaatggatatttgatggatgataatgatggcaggccagaaagt
tcactggatggtaggcgcttttgtaagagaaaaacactcgaaggatatctagcgcaacct
tcaggaagtggaagttctgatcatattcctcttgctgaaaatagcttatggcattctgta
cctgccccacatagtatgagtatagatacaaatatctctgcaccaacagaaactcctcta
gatacaccggcttcaagaagtgcagaaagttctcatagaaatttcagggttaggattaat
gactcacttcagcaagattatcttcctagtaatctgtttcctgctgtggatgatgttgga
aatgttaatctgtcatctgaacagcaatttccggagctccttcctaatatccctttggat
ttgaggtccgtgtctgctgcagatagtggaaatactcaaagtcatcctgttgtaacacat
gttccttctctgcatcgacgtgctcatgctaggtggaattcagcatcaagttccagaact
ggcagttcatcaagttttgctcgagagagaaattcagcaatatttgaagagcctaactca
agaaacatctcacaacatcctatgttcataccttcaactgatgggagaaacttgaaccaa
aatcctgacaactcgaatttaagtggaagaaatatttctgttgctggaaatgtcgcgtcc
tcttctactagggttcttcacagatctcctcaatatcaccggaggctgtcagaattagtc
cgtagatctttgttgtcttcagctggcagtggatctggaggtcataatggtaatagtcgt
ccactacgtttgagttcttctgtctcacaggagatggcactttctggaaaccatgagcat
cgtacatcgagttcaaggtcagcaatgatgtcggagcgacatcttgattcctggaggagt
ttggctggtgcacgtgaaggaagaagcaggctagtcactgagattcgcaatgtgttagat
cttatgcgcaggggtgaggacctaagcgttgaggatgttatgatccttgatcagtcagtc
ttctttgggatgccggatattcatgatcaccatagggatatgcggcttgatgttgataat
atgacatatgaggagttattggcacttgaggagcgcatcggtgatgtttgcactgggcta
agtgaagaagctatttcgagtcatttgaagcagcggaattatatttgcataaaaacagaa
gaacccgaggatgcagaaccatgctgcatatgtcgggaagaatataatgatggagatgat
cttggaacgctggagtgtggccacgatttccataaggactgcattaagcaatggctcatg
caaaagaatttatgcccggtatgcaaaacaacggggcttactacataa
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