Lycium barbarum (goji berry): 132607162
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Entry
132607162 CDS
T09483
Name
(RefSeq) DNA glycosylase/AP lyase ROS1-like
Organism
lbb
Lycium barbarum (goji berry)
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Gene cluster
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
132607162
NCBI-ProteinID:
XP_060176997
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Position
8:125074496..125085505
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AA seq
1816 aa
AA seq
DB search
MDTGQGNSWIPATPGNPGFAKSATICSNRQENQQVNVDWSDLQRKQEAQNAATYHGSTSS
VTIDQCFTTMAAAVGMKSNMYGGGIKMDNNLSSDNVDMWGNMSFGDLLAMAHAGGTTLAD
ETTYSVKSSFKPLINSQNADESSIFSSFPFNLNSPPVMTDAALSSNIPSQFEPVTPDVMK
SKGQESNASDDINDTTVARGIQSNEDTIKRAEANELQQNKEQSELILDQSELQEYQKPDK
TGKEDTELVNNTPEQKPRRRKHRPKVIKEGKPKRTPKPRTEKQPGSETKTEKRKYVRKNK
AGGPTATSAEEVNNTICHEEKPPSSEKTAPAKRKYVRRNQVHKSAEKPSEEGSSVTIGRP
AATSTEEVNNTICHDGKPHSSKETPKAKRKYVRRNQVNKSTEKPAEEGSSGTIDPTEVSL
PKKSCRKSLNFEFQSQASEGNSSYRTSTLDLPANNSGSNEQSAESARLGQGKDATSQETE
VGITYDITCSLNQNVRNYISQPTLQYPVPPTPDKVGLNHDKVMFVNQNESTRGNSRIICS
DLTHDKQANILQMTPQSPSCSNYSSTASLPHGKGLKRQHTCITDEAQCYRINARGAYFNS
MQAYQAILPANELGIYSNVGMHFPSIYPQMRAGKGHSSTSYIKAFTGETTYMPSSQCNIS
GSPSNNSATNIANNRMWNSNAMPAFVEAERLRQWRSNGATQVHDLASLHEIYSQFPTSTS
NEATKHGFGEIYKNSHPSNACMGAPIVETGEVTKKKKKSKTSILVNSAASNMYTHQKFTK
KARGSLPALTWRGMSPIEEIAERLQHLDLNRESSQNQGQYGIITYNTKFQGENALVLYQR
DGSIVPFGGSLVRKRKPRPKVDVDEETDRVWKLLLQDINSEGIDGTDEDKAKWWEEERRV
FNSRADSFIARMRLVQGDRRFSPWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAHFPLK
TDSTQKHEGNTGIIIEEPEECPTDPNVSIRWYEDQPNQSTHCQDSSGVYNTDSNEEKAAV
NGSESSENSTQCIKSAECSVILQSDSSGEGSDLYQESTVMGFGDQKELNDLPSSPSSVVS
SENSAVIQASERADSSNFCSSTSFLKLLQMAGTSGAQGTGCTEHFQEGENFPFLGKELSA
LKQSGLSVESAHPALYATNPQNKLDIETVNDAEVNVELQFQTEDSNCNVQQVPEVPSSSE
TIVDVTERASIVFDSCKSEQRVVESNLKNDNNHVCSKIDSVNGNPSKAKNGRLGKEREKI
DWDSLRLQAQANGKKRERTTNTMDSLDYEAVRCASVNELAHTIRERGMNNKLAERIKAFL
DRIVSEHGSIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDVNVGRI
AVRLGWVPLQPLPESLQLHLLELYPILESIQQYLWPRLCKLDQKTLYELHYHMITFGKVF
CTKGKPNCNACPLRGECRHFASAFASARLALPAPEDKSIVCATENKAANNNPRENFTHLP
LSLPPGNQQPVEHQKLINSAPIIEVPASPEPIVEVPATPEQEQIQAPETDIEDFEDPSEI
PIIELNMAEFTQNVKKYVEKNMQLQQVEMSNALVALTSEAASIPTTKLKNVSRLRTEHQV
YELPDSHPLLEGLDKREPDDPSSYLLAIWTPGETADSMQPPETQCNSQESGILCQNETCS
SCNGIREAHSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPINVPRDCLW
NLPRRTVYFGTSVATIFKGLTTESIQHCFWRGFVCVRGFDQKSRAPRPLLARFHFPASKL
LNKGKGKTNDDKGVAT
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggatacaggccaaggcaattcatggattccagcaactccggggaacccaggttttgcg
aaatcggcaacaatttgcagtaacaggcaggaaaaccagcaagttaatgttgattggtca
gatttgcaaagaaagcaagaagctcaaaatgctgcaacataccatggttcaacaagttca
gtaacaatagatcagtgcttcaccaccatggcagcagcagtaggaatgaagtctaatatg
tatggaggtggtataaagatggacaataacttatctagtgataatgtagacatgtggggc
aatatgtcttttggagatttattggcaatggcacatgctggtggcaccacgctagcagat
gaaacaacttatagtgtgaagagttctttcaaaccgctaatcaattctcagaatgcagat
gaaagctctattttttccagcttccctttcaacttgaattcaccaccagtaatgacggat
gcagccttgagcagcaacatcccgtcccagttcgaaccagtaacaccagatgtgatgaag
agtaaagggcaagaatctaatgcctcagatgacattaatgatacaacagttgcaagaggt
atacagtcaaatgaggatacaataaagagagctgaagcaaatgaactccaacagaataaa
gagcagtcagagctgatcttggatcaatcagaattacaggagtatcaaaagcctgacaag
actggcaaagaggatactgaactggtgaacaatacaccagagcaaaaaccaagaagaaga
aagcacaggcccaaagtgattaaagaaggcaagcctaaaaggactcctaaaccaagaacc
gaaaagcagcctggttcagagacaaaaacagaaaagaggaagtacgtccgaaaaaacaag
gctggcggacctacagccacttctgcagaagaggttaacaatacaatttgtcacgaggaa
aagcctcctagttccgaaaaaaccgcacctgcaaaaaggaagtatgtcagaagaaatcaa
gttcacaagagcgcggaaaaaccgtctgaagagggaagcagtgtaacaattggcagacct
gcagccacttccacagaagaggtaaacaatacaatttgtcacgacggaaagcctcatagt
tccaaagaaaccccaaaagcaaaaaggaagtatgtcagaagaaatcaagttaacaagagc
acagaaaaacctgctgaagagggaagcagtggaacaattgacccgacagaagtttctctt
cctaaaaaatcctgcaggaaatcgttgaattttgaattccaaagccaagcaagtgaaggg
aactcatcatacaggacctcaactttggatttgcctgcgaacaattccgggtcaaatgaa
caatctgcagagtctgcacggcttggacaaggtaaagatgccacaagtcaagagacagaa
gtgggcataacttatgacatcacctgctccctgaaccagaatgtgagaaattacatatca
cagcctacattgcaataccctgttcctccaactccagacaaggttggcttgaatcatgac
aaagtcatgtttgttaatcaaaatgaaagcacaagaggaaatagtagaatcatttgttca
gatttaactcatgataaacaggcaaacattctacaaatgacaccgcagagcccgagttgt
tccaactacagcagcactgcatccttgccacatgggaaaggcttgaaaaggcagcacaca
tgtataactgatgaagcacaatgctacagaataaatgccagaggagcgtatttcaattct
atgcaagcctatcaagcaatccttccagcaaatgaacttggcatttatagtaatgtaggg
atgcattttccctctatttacccgcaaatgagagcaggaaagggtcacagctcaacatct
tacattaaggcttttactggtgaaactacctacatgccttcatctcagtgcaatatcagt
ggttcccctagcaacaattctgcaaccaatatagccaataacagaatgtggaattccaat
gctatgccagcatttgtggaagcagagaggttaaggcagtggagatcaaacggtgcaact
caagtacatgacttagcatctctgcatgaaatttacagtcaatttccaacttctacatcc
aacgaagcaacaaaacatggatttggagaaatatataaaaattcacatccatccaatgca
tgcatgggagctccaattgtggaaactggagaagtaacgaagaaaaaaaagaagtcaaag
acaagcatccttgtcaactcggcagcttccaatatgtatactcatcaaaagttcacaaaa
aaagcaaggggttctctgccagctttaacatggagaggcatgtctccaatcgaggaaatc
gcagaacgcttgcagcatcttgatttaaatagagaaagcagccagaatcaaggtcaatat
ggaatcatcacctacaacaccaagtttcaaggggagaatgcccttgttctttatcaaaga
gatggaagtattgtcccttttggaggttcgttggttagaaaacgaaaaccgcggccgaaa
gttgatgttgatgaagagactgatagggtatggaaacttttgctgcaagatatcaacagt
gaaggcattgatggaactgatgaagacaaggcaaaatggtgggaggaagaacgtagggtg
tttaatagtagagcagactcatttattgcacgaatgcgtcttgtccaaggagacaggcgc
ttctcaccttggaagggatctgttgtggactccgtggttggggtatttcttacacagaat
gtttcagatcacctttctagctctgcattcatgtcactcgctgctcactttcctctgaag
acagacagtactcagaagcatgaaggaaacacaggtattattattgaagaacccgaagag
tgtccaacagatcccaatgtttcaatcagatggtatgaagatcaaccaaatcagtcaacc
cactgtcaggattcttcaggagtctataatacagattcaaatgaagaaaaggcagctgtc
aatggttctgaatcaagtgaaaatagcacacaatgcataaagtcggcagaatgttctgta
attctgcaatcagattcttctggagaaggctcagatctgtatcaggaatcaacagttatg
ggtttcggagatcaaaaagaattgaatgatttgccttcttctccgagttctgtagtttct
tctgagaactctgcagttattcaagcttcagaaagagctgattcaagcaacttttgcagc
tccacttcttttttgaagctattacagatggcaggaacttcaggagcacaaggaaccggg
tgcactgaacattttcaagaaggtgaaaactttccattccttggcaaggaacttagtgcc
ctaaaacaaagtggattgtcagtagaatcggcacatccagcactgtacgcaacgaaccct
caaaataagttggacatagagacagttaatgatgcagaagtcaatgttgaactacaattt
caaactgaagatagcaattgcaatgtccagcaagttccagaagtgccatcctcttcagaa
accattgtagatgtcacagaaagggccagcatagtttttgattcatgtaagtcagagcaa
agagttgtggagtcgaacttgaaaaatgacaataatcatgtttgtagcaaaatagacagt
gtaaatggcaatccttcgaaagcgaaaaatggacgacttgggaaggagagagagaaaatc
gattgggacagcttacggttacaggcccaggccaacggcaagaaaagagaaaggacaaca
aacacaatggattcactggactatgaagcagtgaggtgtgcaagtgtcaatgagttagcc
cacacaattagagaacgaggaatgaacaacaagctggcagagagaatcaaggcttttctt
gaccggattgttagtgaacatggaagcattgatcttgaatggctgagagatgttccacca
gacaaagcaaaagagtatctattgagcataaggggcttgggtctgaagagtgtggagtgt
gtgagacttttaacacttcaccaccttgctttccctgttgacgtgaatgtaggacgtata
gctgttagactagggtgggtgcccctgcagccgttgcctgagtcactacagttgcatctt
ctggaactgtatccaatactggagtcaattcaacagtacctatggccacgtctctgcaag
cttgatcaaaaaacattatatgagctacattaccatatgatcacctttggaaaggtcttc
tgtacaaaaggcaaacccaattgcaatgcatgtccactgagaggagaatgcagacacttt
gcgagtgcatttgcaagtgcaaggcttgcccttcccgcgccggaagataaaagcattgtg
tgtgcaacagaaaacaaagccgctaacaacaatccaagggaaaacttcactcacctgcct
ctgtcattacctcctgggaatcaacaaccagtggagcatcagaaattgatcaactcagct
cctattattgaagtgccagcatcaccagagcccattgttgaagttcctgccacacctgag
caagaacaaatacaagcaccagaaactgacatagaggactttgaagatcctagtgagatt
cctataattgaattgaatatggcagagttcactcaaaatgtaaagaagtatgtggaaaaa
aatatgcagcttcaacaggtagaaatgtcgaatgccttagtagccttaacttcagaagct
gcatcaattcccactactaaacttaagaatgttagccggctcagaacagaacaccaagtc
tatgaacttccagattctcatcctcttttggaagggttggacaaaagagaaccagatgat
ccttcttcctatcttcttgctatttggacaccgggtgaaacagcagattctatgcaacct
ccagaaactcagtgcaactctcaagaatctggaattctatgtcaaaatgagacgtgttcc
tcatgcaacggcatacgtgaagcacattctcaaacagtaagaggaactcttctgatacca
tgtcgaacagctatgagaggaagctttccgctcaatggtacatactttcaggtcaatgag
gtgttcgcagaccatgactccagccttaacccaatcaatgtcccaagggattgtctgtgg
aatctcccacggaggactgtctactttggaacctcagtagccacgatattcaaaggccta
accacagaaagcatccaacactgcttctggagagggtttgtttgtgtgcggggatttgat
cagaagtcacgagcacctcgaccgctgctggcaagatttcactttccagccagcaagtta
ttaaataagggtaaaggaaaaacaaatgatgacaaaggagtagccacctga
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integrated database retrieval system
