Lycium barbarum (goji berry): 132618938
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Entry
132618938 CDS
T09483
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132618938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbb02000
]
132618938
04147 Exosome [BR:
lbb04147
]
132618938
04090 CD molecules [BR:
lbb04090
]
132618938
Enzymes [BR:
lbb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132618938
Transporters [BR:
lbb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132618938
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132618938
CD molecules [BR:
lbb04090
]
Proteins
132618938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_21
AAA_15
AAA_22
AAA_16
AAA_30
nSTAND1
Pkinase
Motif
Other DBs
NCBI-GeneID:
132618938
NCBI-ProteinID:
XP_060189906
LinkDB
All DBs
Position
11:complement(4302506..4326239)
Genome browser
AA seq
1235 aa
AA seq
DB search
MQSLLSQVVSLLHSWPKPTVGTLAYIAPEVLSRREYDDKYSLRLLYVAIGVGLSAFVEGL
CWARTAERQTSRMRLEYLKSVLRQEVGFFDTQAAESSTTYQVISTVSADSTTIQITIGEK
IPDCLAYMSSFLFCHIFAFLLSWKITLATIPFTLMFIIPGLGFGTMMMNVGMQMIESYGV
AGGIAEQAISSIRTLYSYVAENQTLEKFSQSLQKVMELGIKQGFARGLLLGSLGMVYISW
AFQAWLGSILVSKHGEKGGDVFVAGFNVLMGGLNILSALPNLTAITEAKSAAIRITEMID
RQPAIDTEDKKGKALSYVRGEIVFNGVYFSYPSRPDTPILQGLNLRISPGKTTGLVGGSG
SGKSTIISLLQRFYDPIEGDISLDGHKIKKLHLKWLRSQIGLVNQEPILFATTIKENILF
GKEGATMEEVEKATKAANAHDFIIKLPDAYETQVGQFGLQLSGGQKQRIAIARALIRDPK
VLLLDEATSALDSQSERVVQEALDHASMGRTAIVIAHRLSTIRMANRIVVLQQGRVIESG
THEELMQMTDGEGGEYYKMVQLQQLATLNDVVNTPSQKTGGRSSNLKGTIPQSPLNMISS
AAATPVMSPFSPAFFSRSAPFSAPYSVQYEESYDSYDDHFIREVYPTPSQFRLLKMNAPE
WGRALLGGIGAIGSGAVQPINAYCVGAVISVYFRPDKSSIQSHARVYSFVFIGLAVFNFF
TNLIQHYNFAVMGEKLTRRIREKLLAKLMTFEIKWFDQDENTSAAICARLSTEANMVRSL
VGDRMSLLAQAFFAATFAYTLGLFLTWKLALVMMAAQPLLIGSFYARTVLMKSMSVKAQK
AQREGSQLASEAVINHRTITAFSSQKRIVGLFKDTLEGPKKESIRQSWYAGVGLCSSQFL
AAASTALAYWYGGKLLSQGEISPEKLFQAFLALLFTAYTIAEAGSMTKDISRGSNAVGSV
FAILDRNTEINPDHSSAIDATRTQIKGRVELKRVFFAYPSRPDQLIFRGLSLKISAGSTV
ALVGQSGCGKSSIIGLIERFYDPDKGSVYIDEKDIKDYNLRSLRRSIALVSQEPTLFAGT
IYENIAYGKENAKDYEIRKAAVLANAHEFISGMNDGYETQCGQRGVQLSGGQKQRIAIAR
AILKNPKILLLDEATSALDTVSESVVQEALEKMMVGRTCIVVAHRLSTIQKATSIAVIKD
GIVAEQGSHSDLLSVGKHGTYYSLVKLQGGNSPYR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcctattatctcaagtcgtctcactattgcattcatggccaaaaccaaccgtt
gggactctagcttacattgctccggaggtcttgtccagaagagaatatgatgacaagtat
tctctcaggctactctatgtcgcaattggagttggactgtctgcttttgttgagggactg
tgttgggcaagaactgctgaaagacaaacatctcgaatgaggctagagtacctaaaatct
gtgctgaggcaggaagttgggttttttgacacacaggcagctgagtcttccactacttat
caggtgatttcaacagtctcagctgattcaactaccatccaaatcaccataggcgagaag
atacctgattgcctagcttacatgtcatccttcttgttctgccatatctttgcctttctg
ctatcatggaagatcacgttagccacgataccattcaccttaatgttcatcatccctgga
cttggattcgggacaatgatgatgaatgtgggaatgcagatgatagagtcttatggtgtt
gctggaggaatagcagaacaagctatctcatctataagaactctatattcatatgtggct
gagaaccaaactctcgaaaagttcagccaatcattgcagaaagttatggaactaggaatt
aaacaaggctttgctagaggcctgttgctaggtagcttgggaatggtttatattagctgg
gcttttcaagcatggctcggatcgattttagtcagcaaacacggagaaaaaggaggggat
gtttttgtagcaggtttcaatgttcttatgggaggattaaatattctgtcggctcttcca
aatcttacagcaatcacggaggcaaagtctgctgcaattcggatcacagagatgattgat
cgacagccagctattgacactgaagataagaaggggaaagcattgtcatatgtaagagga
gaaatcgtattcaatggcgtatacttcagttacccttcaaggcccgatacgcctatcttg
caaggcctgaatcttagaatttcgcctggaaaaactacaggacttgtagggggtagtggt
tctgggaagtccaccatcatttcattgcttcagagattctacgatcccattgaaggcgat
atttccttggatggacacaagataaagaaactccatctaaaatggcttagatcccaaata
ggtctggttaatcaagaaccaattctctttgcaacaaccataaaagagaacatattattt
ggcaaggagggagcaactatggaagaagtagagaaggcaacaaaagctgcaaatgctcat
gactttattatcaagttaccagatgcatatgaaactcaggttggccaatttgggctgcag
ttatctggaggacaaaagcaacgaatagccatagcgagggctttgataagagacccaaaa
gtcctgttgcttgatgaagctacaagtgcactggattcacaatctgaaagagttgtacaa
gaggctctcgatcacgcatctatgggaagaactgcaatcgtcatagctcaccgtctgtcc
accattagaatggcgaataggatagtggttcttcaacaagggagagtaattgagtctgga
acacacgaagagcttatgcaaatgactgatggggaaggtggggagtattacaaaatggtg
cagttgcaacaactagccacattaaatgatgttgtcaataccccgagccaaaagactggt
ggaagaagtagcaacctaaagggcactataccacaaagtccactgaacatgatctctagt
gcagctgccacaccggttatgtccccgttcagcccagcatttttttcccgaagtgcacca
ttctcagctccttactccgttcagtatgaagaatcctatgacagttatgatgaccatttc
ataagagaggtttatccaacaccttcacaattccgtttactgaaaatgaatgctcctgag
tggggcagagccttgcttggaggcataggagcaataggttcgggagctgttcagccaatt
aatgcatactgcgttggggcagttatatctgtttacttccgacctgataaatcctccatt
caatcccacgcgagagtctattcttttgtattcataggtcttgctgttttcaacttcttc
acaaatcttatccaacactataattttgctgtcatgggagaaaagctaaccagaaggata
agggagaaactgcttgctaaactcatgacctttgagatcaaatggttcgatcaagatgag
aacacgagtgctgccatatgtgcccggctatcaactgaagccaacatggttcgttccctc
gtaggagatcgcatgtcactgctagctcaagcgttttttgccgctacatttgcttatact
ttaggacttttcctcacatggaaacttgccttagtgatgatggcagctcaaccattgctc
attggaagcttttatgcgagaactgtgctgatgaagagtatgtctgtaaaagcacagaaa
gctcaaagggagggaagtcaactagcaagtgaagctgttattaatcatagaactataact
gctttctcatctcagaaaaggatagtagggctctttaaagacacattagaaggtcctaag
aaggaaagcatacgacaatcttggtatgccggtgtaggtttgtgtagctctcaattccta
gctgcagcttctacagctttagcttactggtatggggggaaactattgtcgcaaggggaa
atatctcccgagaaactttttcaagcatttctagcactgcttttcactgcttatactatt
gctgaggcaggaagcatgactaaagatatatctaggggaagtaatgctgtgggctcagtc
tttgcaatcctcgatagaaacactgagattaatccagatcattcatcagcaatagatgca
acaaggacacaaataaagggacgtgtggagctgaaaagagtattttttgcctatccatca
agaccagaccagctgattttcagaggattaagcctcaaaataagtgcaggatccacagta
gcattagttggacaaagcggttgtggaaaatcaagtataattgggcttattgaaagattt
tatgatccagataaaggatcagtctatatcgacgaaaaggatataaaagactacaatttg
agatcactgaggagaagtattgcattagttagccaggaaccaactctctttgcaggaact
atttacgagaacattgcctacggaaaagagaatgccaaagattatgagataagaaaggct
gctgttcttgctaatgctcatgagtttataagtgggatgaatgatggatatgaaactcaa
tgtggacaaaggggagtacaactatcaggaggtcaaaaacaaagaatagccattgcccga
gcaatactcaagaacccgaaaatcctgcttttagacgaagcgactagtgctcttgacact
gtatctgaaagcgtggtccaagaagcactagagaagatgatggttggccgaacgtgcatt
gttgtggctcatcgcctatcaacaatacagaaagcaacttctattgctgttataaaggat
ggaatagttgcagaacaaggctcgcattctgatctactgtctgtaggaaaacatggcaca
tattattcactggtaaaattgcaagggggaaactctccttacaggtaa
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integrated database retrieval system
