Lycium barbarum (goji berry): 132623341
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Entry
132623341 CDS
T09483
Name
(RefSeq) ribulose bisphosphate carboxylase small subunit, chloroplastic 5
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00630
Glyoxylate and dicarboxylate metabolism
lbb00710
Carbon fixation in photosynthetic organisms
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
lbb01200
Carbon metabolism
Module
lbb_M00165
Reductive pentose phosphate cycle (Calvin cycle)
lbb_M00532
Photorespiration
lbb_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
132623341
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
132623341
Enzymes [BR:
lbb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
132623341
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Motif
Pfam:
RuBisCO_small
RbcS
Motif
Other DBs
NCBI-GeneID:
132623341
NCBI-ProteinID:
XP_060194066
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Position
12:94166711..94167927
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AA seq
180 aa
AA seq
DB search
MASSVMSSAAVATGANAAQASMVAPFTGLKSTASFPVSRKSNLDITSIASNGGRVQCMQV
WPPINMKKYETLSYLPDLSDEQLLKEIEYLLKNGWVPCLEFETEHGFVYRENNRSPGYYD
GRYWTMWKLPMFGCTDATQVLAEVGEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEGY
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcagtgatgtcgtctgcagctgttgccaccggcgccaatgctgctcaagcc
agcatggttgcacctttcactggcctcaaatccaccgcctccttcccagtttcaagaaag
tctaaccttgacattacctctattgctagcaatggtggaagagtccaatgcatgcaggtg
tggccaccaattaacatgaagaagtacgagactctctcataccttcctgacttgtccgac
gagcaattgctcaaggaaattgagtaccttttgaaaaacggatgggttccttgcttggaa
ttcgagactgagcatggattcgtttaccgtgagaacaacaggtcaccaggttactacgac
ggcagatactggacaatgtggaagttgcccatgttcgggtgcactgatgctacccaggtc
ttggctgaggtgggagaggccaagaaggcatacccacaagcctggatccgtatcatcgga
ttcgacaacgttcgtcaagtgcagtgcatcagtttcatcgcctacaagcccgaaggctac
taa
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