Lycium barbarum (goji berry): 132623848
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Entry
132623848 CDS
T09483
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132623848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132623848
03051 Proteasome [BR:
lbb03051
]
132623848
Membrane trafficking [BR:
lbb04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
132623848
Proteasome [BR:
lbb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
132623848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Dsc3_N
Ubiquitin_2
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
132623848
NCBI-ProteinID:
XP_060194642
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All DBs
Position
12:72314478..72322962
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AA seq
552 aa
AA seq
DB search
MGGGDTTSAAAAAAGTKEEVTINVRCSNGSKFTVEVTLESTVGSFKSVLAQHSDIPAGQQ
RLIYKGRILKDEQTLASYGLEADHTVHLVRGFAPAASSDTAGAANTENPNTNQNAPSDAA
PNVGGPFAGSGLGASLFPGLGSGGGGGGGLLGAGLPDFEQVQQQLTQNPNMMRDMLNMPL
VQNLMNNPEIIRNMIMNNPQMREIMDRNPELAHVLNDPATLRQTMEAARNPELMREMMRN
TDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMTGDARSDVGSNPFAALLGAQGAGQG
RDQSTNPPTTGSETAANTPAPNTNPLPNPWASAGTAAGQTNTTARSNAAGETRATPPAGL
GGLALPDLEQMLGGMPDAASLNQMMQNPAVSQMMQSLLSNPQYMNQMLGLNPQLRNMLDS
NSHLREMMQNPEFIRQMTSPETMQQLMIFQQGLLSQLGRQQTNQPGQNAGGAAADNNMGM
EMLMNMFGGLGSGGLGGVPNRSNVPPEELYATQLAQLQDMGFFDTQENIRALIATAGNVH
AAVERLLGNLGQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggcgatactactagtgctgctgctgctgcggcggggacaaaagaggaagtt
acaattaatgttcgatgttccaacggctcaaaattcacggttgaggtgactttagaatcc
accgttggatcattcaagtctgtccttgctcagcattccgatattcctgcaggacagcag
agattgatctataaaggacggatcttaaaggacgaacaaaccctagctagctacggtctt
gaggcagatcacactgttcatttggttcgaggttttgcaccagctgcctcttctgatact
gcaggtgcagccaatactgaaaatccaaatactaatcagaatgcaccctctgatgccgct
ccaaatgtaggcggtccatttgctggatcgggccttggggcttcactgtttcctggtctt
ggaagtggtggcggcggtggcggtggtttacttggagctggccttccggattttgaacag
gtccagcagcagttgacccaaaaccccaacatgatgagagacatgctgaatatgcctctc
gttcagaatttaatgaataacccagaaatcatccgtaacatgatcatgaacaatcctcaa
atgcgagagatcatggatcgtaatccagagcttgcccacgttctcaatgatcctgctact
cttcgtcagacaatggaggctgcgcgaaaccctgaacttatgcgtgagatgatgcgtaat
actgacagggcaatgagcaatattgaatcttctcccgagggatttaacatgctgaggcgc
atgtatgaaaatgtacaagagcctttcctaaatgcaacaactatgactggagatgcaaga
agtgatgtgggttcaaacccgtttgcggctcttttgggtgcccagggtgcggggcaaggc
agagaccagtcaactaatcctccaactactggttctgagactgccgcgaacacacctgct
ccaaatactaatccacttcctaatccttgggcttctgctggcactgcagctggccaaact
aataccactgctaggtcaaatgctgctggggaaaccagggcaacaccgcctgctggctta
ggtgggcttgcgctcccagatcttgagcaaatgctgggtggcatgccagatgctgcttca
ctaaatcagatgatgcagaacccagccgtctcacagatgatgcagtctctcctctcaaat
cctcaatacatgaaccagatgcttgggctcaacccacagctaaggaacatgcttgattcc
aactcccatcttcgagaaatgatgcaaaaccctgaatttattcggcagatgacttcccct
gagacaatgcagcaacttatgattttccagcaagggcttttgtctcaacttggtcgacaa
caaacaaaccaaccgggtcagaatgctggaggtgcagccgctgacaacaatatgggaatg
gaaatgctgatgaacatgtttggtggacttgggtcggggggtttgggtggtgtccccaac
agatccaacgtgcctccggaggaattatatgccactcagctagcacagttacaagatatg
gggttctttgacactcaagaaaatatcagggcattgattgccactgcaggcaatgttcat
gctgcagtagagagacttcttggaaatcttggacagtaa
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